Rana temporaria (common frog): 120921853
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Entry
120921853 CDS
T07929
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120921853 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120921853 (PEX6)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120921853 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_25
PEX6_4th
RuvB_N
DUF815
Vps4_C
Mg_chelatase
AAA_22
AAA_33
TsaE
AAA_7
nSTAND3
RNA_helicase
NPHP3_N
TIP49
NACHT
AAA_18
AAA_28
Parvo_NS1
IstB_IS21
AAA_24
PhoH
AAA_2
AAA_14
SLFN-g3_helicase
ATPase
Motif
Other DBs
NCBI-GeneID:
120921853
NCBI-ProteinID:
XP_040190269
LinkDB
All DBs
Position
4
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AA seq
964 aa
AA seq
DB search
MRSDQCSPGGPLMSVRTRGPLTPRRLLLSTPCGVMAVGEEWPNRRSQGAGLGPQQWVERQ
KLGCIGVIGGKDYGGAPDLAECSPVVSSFARGACPSRVRVAAVDAESLVRAGVLQEVGDP
PDRGSALWVSKKQLRDLGLYHREWVIVTSPGAPPNHGAPPHHGAPPNHGAPPNHGAPPNP
GAPPHHGAPPNPGAPPHHGAPPHHGAPPNPGAPPNPGAPPHHGAPRHLAVILAAELCLGH
PQKYSHLLSGRRGPPDPGTALISAPLSFNLTSGNGALSEVLIERFCSALTAGSRSSLAAP
PFAKELYIQIVRSPLYNSEASYQAALCRHFHTTRAVQAGDVLCVSGLSHADFLHNKSPIP
VRCPDLYFKVCRIEGQKGARPNVGYLADTNHTTLYQVGTTHSYVPSFPSRDGHVFWSSLF
PAGLSHVVDDLCRLLQPHVQNSGHVVGAGGRVLLGGPAGSGKAMVVRAACSRLHLHLFQV
ECGRLCRENSAGMVTRLRSLFSQAGDCRPCVLLLCHVDVLGRERDGSGEDTRVTSALSNL
LLDSTFRDWPVIVIGTSCRPGDVSLDLQSCFIHEVSLPAPSEDQRLSMLTALSAPLTLTR
DVKLPLLARKTAGFVLGDLCTLLATAGRNACTRIRKSCALTQEDEEDLLASGFPITSKDL
ESALSELQNSHSQAIGAPKVPSVRWKDVGGLNEAKRQLLDTVQLPLEHPEILSLGLRRSG
VLLYGPPGTGKTLLAKAVATECAMTFLSVKGPELINMYVGQSEENVREVFSRARAAAPCI
IFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAEMDGLHSSNDVFVIGATNRPDLLDSALL
RPGRFDRLVYVGINESRESQLRVLEAVTHKFCLDPAVELSLVLEYCPPALTGADLYALCA
DAMMAAIKEKVQRLQEGSEELSTELVLRMEHFLQAADRLQPSVSQQELQRYEKIRAQFSA
PPNS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccgatcagtgttcccccggggggcccctaatgtctgtgcggacccggggcccc
ctcaccccccgccgccttctactcagcaccccctgcggggtcatggctgtgggggaggag
tggccaaacaggagatctcagggggcgggactgggcccccagcagtgggtggagaggcag
aagttggggtgtataggtgtgattggagggaaggattatgggggtgccccggatttggcg
gagtgctccccggtggtctccagctttgctcggggggcgtgtccttcgagggtccgggtg
gcggcggtggatgcggagtccttggtgagggcgggggttctgcaggaagtgggggatccc
ccggatcgcggctcggccctctgggtgagtaagaagcagctgcgggatttgggtttgtat
caccgggagtgggtgatagtgacttcccctggagcgcccccaaaccacggagcgcccccg
caccacggagcgcccccaaaccacggagcgcccccaaaccacggagcgcccccaaacccc
ggagcgcccccgcaccacggagcgcccccaaaccccggagcgcccccgcaccacggagcg
cccccgcaccacggagcgcccccaaaccccggagcgcccccaaaccccggagcgcccccg
caccacggagcgccccggcacctcgccgttatcctggcggcagagctgtgcttggggcac
ccccagaaatacagccacctgctgagtggaaggcggggtcccccagaccctgggaccgcc
ctcatctccgcccccctcagcttcaacctgacgtctggaaacggggcgctgagcgaggtg
cttatagagcgtttctgctcggcgctgacggcaggaagtcgatcgtctctggcggctcct
ccctttgcgaaggagctctatatacagatcgttcgctcgcctctttataacagtgaagct
tcgtaccaggcggctctgtgccggcatttccacaccaccagggcggtccaggctggagat
gttctctgtgtctcgggtctctcacacgccgatttcctccacaacaaatctcccatcccg
gtcaggtgtcctgacctgtacttcaaggtgtgccggatagaaggacagaagggagcgcgc
ccgaatgttggatatctcgctgacaccaatcacaccacactctaccaggtgggaaccacc
cacagctatgtgccctccttcccttcccgggatggtcatgtcttctggagcagtctgttc
ccggcgggtctctcgcatgtcgtggatgatctgtgccgattgctccaacctcatgtacaa
aacagcggccatgttgttggagccggaggtcgggtcctcctgggcggaccggcaggcagt
gggaaagcgatggtggtgagagccgcatgcagtcgccttcatttacatctcttccaggtt
gagtgcggccggctgtgcagggagaacagcgccggaatggtgactcgccttcgctcgctc
ttctcccaggctggtgattgtcgtccctgcgttcttctcctctgccatgtggatgtcctc
gggagagagcgagacggctctggagaggacacccgggtcacctccgctctgagcaacctc
ctgctggactccacattcagggattggccagtgattgttatcggtacttcttgtcgcccc
ggagacgtttccttggacttgcagtcgtgttttatccatgaagtttcccttcccgcgcca
tcagaggatcagcggctgtccatgctcacggccctcagcgctccgctcacactgaccaga
gatgtgaagctccccctgctggctcgtaagactgcgggctttgtcctcggagatctctgc
accctactggccaccgctgggcgcaacgcctgtactaggatccgaaaatcatgcgctctc
acacaggaggatgaagaggatcttttagcttccggttttccgatcacctcaaaggatttg
gaaagcgccctctctgagctgcagaattctcattctcaagccattggcgccccaaaggtc
ccttcagtgcgttggaaggatgttggaggacttaatgaagcaaagcgtcagctcttggac
acagtacaacttcctcttgagcaccctgagattctttccctaggtcttcgtaggtctgga
gtcttactttatgggcccccgggaactgggaaaactttgcttgctaaagctgtggccact
gaatgtgccatgacattcctcagtgtgaaagggccggagctcatcaacatgtatgtgggc
cagagcgaggagaacgtccgagaggtattttcccgcgctcgggcggccgccccgtgtatt
atattctttgatgagttggactcgttggctcccaaccgtggaaggagcggagattccgga
ggcgtcatggaccgggtggtgtcgcagttgctggcggagatggacggattgcactcctct
aatgatgtctttgtgatcggagccacgaatcggccggatctcttggactcggctcttcta
cgaccggggaggttcgatcgattggtttatgtcggcattaatgagagtcgggagtcccag
ctgcgggtcctggaagccgtaacacacaagttctgtttggacccagcagtggaattgtct
ctcgtattagaatactgtccacctgccctgaccggagcggacctctacgctctgtgtgca
gacgccatgatggcggccataaaagagaaggttcaacgccttcaggaaggatccgaggaa
ctttctacggagctggtcctacgaatggaacattttctgcaggccgccgatcgtcttcaa
ccatccgtgtcccagcaggagttgcagcgctatgagaagatccgggcgcagttctcggct
cctcccaactcatag
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