Rana temporaria (common frog): 120921898
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Entry
120921898 CDS
T07929
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120921898 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120921898 (ATRX)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120921898 (ATRX)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120921898 (ATRX)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120921898 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
120921898
NCBI-ProteinID:
XP_040190334
LinkDB
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Position
9
Genome browser
AA seq
1916 aa
AA seq
DB search
MTAEPKSESKLNTLVQKLHEYLAHSSEESEDTTSPSRQSTAKSAPKSKSSHRSLPMETSM
EEGGSAEKARLLGASRSKRKPSFVTKYVESDEDPKEEIVAADKNSDPEVDMESLPLGTVV
VQPEPVLNEDKDDFKGPEFRSRCKVNKPDLSLSKKRPEDGLQGIVSCTSCGQQVNHFHKD
SVYRHPALQVLICKTCFKYYMSDDINRDADGMDEQCRWCAEGGNLICCDFCHNAFCKTCI
LRNLGRKELSTIMDEESKWRCYICQPEPLLDLVSGCNTVIDNLETLLQKKKIKGENDKGK
VCDQNQKTSSCNGQEKVSSSYSGAISYSYKALMVPKEMLKKTKRIVETTTNLNKSFMKFL
QHESENVVINSSTKVRQLKAFKSILGDLKKAHEALEERLAFELTSAQRKSSSKKSKDVTS
EPKHSKERKSSEQDSERQRSSTKVRDGEKVTNCESGKHKASEESPEKDQNGKPIEVLDDV
EDMEGDEVEGDEMEDDEVQEVKGDDVEGDEVQEVEGDEVPEVEASSKNDATMEVEDVEEL
GEMDNTTASKEKEEQGEEQEQKDSDINSDVEEQSPKSQQSRKKKATEKSRRASSERKRRN
SEKTSKEAVSGAESQDENSESSPKGAKSRSSRNTKKGGSFEANAEEALDMDIVSVPSSVP
EDIFDSLDSAMEAQNALNESKSSKKDEKEPKTPVKKELILKLTPLSFSKGSKRSERTPSR
KGRGSGSDDARSSGNEHSSDNEDPKRRKSPRVKTTPKRRPNEAPALSNMEEESSADKEKA
KTEPSKRRKEKTTSSDGTATSRGRKAKKFEEKTPKSGSDSDEMPDVLKKAALMSNSSSEP
ESGAESKPAKEKDQKGGGKRKRKSSSSGTEVTKRQTRNSTAAKKQDHSDDSNYDSDLEKK
IEKLGNIEDAKKSTKKAKSYQESGSSAEERGRKKHKKGKATKERSKSKEPSKSKKAKKQS
ASSSDLSEESHDNASHNSEDGSEDEQKMKPLVENEVLTKAGFCQSSGDEEGTKSGAHAAE
DEEEDDDDEDPENRIAKKMLLQEIKAGLSSDEEVSSDEPEEGKKEKKVKSRKGGKDDQDD
DQTNEESSDSESDSESAKKPRYRHRLLRHKLSVSEGESDDEKDGKKKKKDKSANSKDGKR
RNRRKVTSDESGSGSDGSDVSEGDSESDSDDQRPRTRAARKEAEEKGRSYKQKKKRRRIK
VQDSSSDSKGNSEDGDQDDDSDSKSPGKGRKKIRRILKDDKLRSETQNALKMEEERRKRI
AERERQREKLREVIILEDASPVKCPITTKLVLDEDEETKEPLVQVHKSMVTKLKPHQVDG
VQFMWDCCCESLKKSKKERGSGCILAHCMGLGKTLQVVSFLHALILNDKMDFSTALVVCP
LNTVLNWVNEFDKWQEGLNDDEKLEVIELATVKRPQERAYMMQRWHEDGGVLIIGYEMYR
NLTQGRNVKSKKLKEMYQKTLVDPGPDFVVCDEGHILKNEASAISKAMNSIRTKRRIILT
GTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHIL
YEMLAGCVQRRDYTALTKFLPPKYEYVLSVRLSPIQCKLYRYYLDNITGLYTMEDPHFDR
SRRRAFSELEVDVYHLPDSLGIRLAAKYSEAGVGTVSGSGVGPGFLRGESFPSHGENILP
AAAERFSSHDYHEIGIGGNKRRRSGLVGLTNRLNVGAVPGVNYGQINFGSAQSPYMPLNL
GALSALNNQQLEDLINQGREKVVEATNSIASARIQPLEDIIAGVRKENPTLTESQAQSLA
LSRQSTQELEIKRREAVYNDVLAKQQMLISCVQRILMGRRLQQQYNQQQQQQIALQQQAA
LSRLIMQKSPNMILNPSNYQQIDMQGLYQNLQGHHLQRAPAPIRAKSPGSSQGKKN
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagcccaagagtgaaagcaagttaaacacgttggtgcagaaacttcacgaa
tatttagctcactcctcggaggagtcggaggacaccacttctcccagcagacaatccacc
gccaagagtgcgccaaagtctaaatcctcccacagatccctccccatggagaccagcatg
gaagagggagggtccgcggagaaggccaggctcctgggagcttctcgctcaaaaaggaag
ccctcctttgtgacgaagtatgtggagtctgacgaggatcccaaagaagagattgtcgca
gcggacaaaaactctgatcctgaggtggatatggaaagcttgcctctaggtactgtggtg
gttcagccagagccggtcctaaatgaggacaaagatgacttcaaaggaccagaatttaga
agtcggtgtaaagttaataaacctgacctttcattgtccaagaaacgtccagaggacggt
ctccaaggaatcgttagctgcacatcatgcggccagcaagtcaatcactttcacaaggac
tcggtttatagacacccggctctccaggtcctcatttgtaagacttgcttcaaatattac
atgagtgacgacatcaaccgcgacgccgatgggatggatgagcagtgcaggtggtgtgct
gaaggagggaatctcatttgctgcgatttctgccacaatgccttctgcaagacctgcatc
ctccggaacctcggccggaaagagctctccactattatggatgaagaaagcaaatggcgc
tgttatatttgccagccggagcccttgctggacttggtatctgggtgtaacaccgtgatt
gacaacttagagacactcttacagaaaaagaaaattaagggagagaatgacaagggcaag
gtgtgtgaccaaaatcagaaaacctcaagctgtaatggacaagaaaaagtttctagttcc
tattctggtgcaatttcttattcctacaaagcacttatggtgcctaaagaaatgctaaaa
aaaacaaagcggatagtggagacgacaaccaacttaaataaaagcttcatgaaatttctg
cagcacgaatctgaaaatgtggttattaactccagcactaaagtaaggcagctgaaggcc
tttaaatccatcttgggagacttgaagaaggcccatgaagctctggaggaacgtttggcc
ttcgagctcacctctgctcaaaggaaaagctcctcaaagaaaagcaaagatgtgaccagt
gagccgaaacattcaaaagagagaaaatcgagcgaacaggacagtgaacgccagagatcc
tcaacgaaagtgcgtgacggggaaaaggtgacgaattgtgaaagtggaaagcacaaagcc
tctgaagagagcccagagaaagaccagaatgggaagccgattgaagttctggatgatgtg
gaagatatggaaggcgatgaggtggaaggtgatgagatggaagacgatgaggtgcaggag
gtgaaaggtgatgatgtggaaggcgatgaggtgcaggaggtggaaggcgatgaggtgccg
gaggtggaagcgtcctcgaagaatgatgctactatggaggtggaggatgtggaggaactt
ggggaaatggacaatacaactgctagtaaagaaaaggaggagcagggagaagaacaagag
cagaaagactcggacattaattctgatgtggaggagcagagtcctaaatcgcagcaaagc
agaaagaaaaaagccactgagaaatcacgacgcgcttcgagtgaacgtaagaggagaaac
tcggagaagaccagtaaggaggccgtgtctggtgccgagtcgcaggatgaaaactcagag
tcctcaccaaaaggcgccaagtcacgctcttctcggaataccaaaaaaggcggttcattt
gaggccaacgctgaagaagctctggacatggacatagtttctgtcccctcttctgttcct
gaagatatatttgacagcttggattccgcgatggaagcccaaaacgctttgaatgagtca
aaaagtagcaaaaaagatgaaaaggagcccaaaacaccggttaaaaaggagttgattctg
aaattgactccgttgtccttctccaagggatcgaagcgctcggagaggactccatcaagg
aaaggcagagggtctggaagtgatgatgccaggagctccggcaatgagcattcatccgac
aatgaagaccccaagcgacgcaaatctccacgcgttaaaaccacacccaagcgacgtcca
aacgaagcacctgccttgtccaatatggaggaggaaagtagtgctgataaggagaaggct
aaaactgaaccctcaaagaggaggaaagagaagacaacctcctcagacggaactgccact
tccagaggtagaaaagctaaaaaatttgaggagaagacgccaaaaagcggctctgattct
gatgaaatgccagatgtcctgaaaaaggcagctttgatgagcaactcctcctctgaaccc
gagagcggtgctgagtccaaaccggccaaggagaaggaccagaaaggtggagggaagaga
aagcggaagagttccagttctggcaccgaggtgaccaaacgacaaaccagaaactcaacc
gctgcaaagaaacaagaccactctgacgactccaactacgactccgacctggagaagaag
atcgagaagttaggaaatatcgaggatgccaagaaatccaccaagaaagccaagagttac
caagaaagtggctcctccgctgaagaacggggccgcaaaaaacacaaaaaaggcaaggcc
actaaggagcgcagcaagagtaaggagcccagcaagagcaagaaggcaaagaaacaatcg
gcctcctcttctgacttgtcggaggaaagccacgataatgcaagccataactcggaggac
ggcagtgaggacgagcagaagatgaaacccttggtagaaaatgaagtcctaaccaaagca
gggttctgccagtcatcaggtgatgaagaagggacaaaatcaggtgcacacgctgccgag
gatgaagaagaagacgatgatgacgaggatcctgagaataggatcgccaagaagatgctt
ctgcaggaaataaaagccgggttgtcgtctgatgaagaagtatcttctgatgagccggag
gagggcaagaaagagaagaaggtcaaatctcgcaaaggcggcaaagatgatcaggatgac
gatcagacaaatgaggagagttcagactccgagagcgactcagaatctgcaaagaagccg
cgatacagacaccgcctgttgcgtcacaagctgtctgtgagtgaaggcgagtccgatgat
gaaaaagacggcaagaaaaagaagaaagacaaatctgccaattccaaggatggaaaacgg
cgtaaccgaagaaaagtgaccagcgatgagtctggatctggcagcgacggctcagatgtc
agcgagggagacagtgaaagcgactctgatgatcagcgacccagaaccagggcagcgagg
aaggaggccgaggaaaaagggaggagctacaagcagaagaagaagaggcggcggataaag
gtgcaggactcctccagtgactccaaggggaattcggaggacggagaccaagatgacgac
tcggactccaaatctccaggaaaaggtcgcaagaagatccggagaatcctaaaagatgac
aagctgagatctgagactcagaatgccttaaagatggaagaagagaggaggaagagaatc
gcagagcgagagcgacagcgggagaagctgcgggaggtcatcattctggaagacgcttca
cctgtaaagtgtccaatcaccaccaagctggtcctggacgaggatgaagagaccaaggaa
cccctcgttcaggtgcacaagagcatggtgaccaagctgaagcctcaccaggtagacggt
gttcagttcatgtgggattgctgctgtgagtccttgaagaagtcgaagaaggaacgaggc
tcggggtgtatcttggctcattgtatgggtcttgggaagacattgcaggtggtctctttt
cttcacgctctcattctgaatgacaagatggatttcagcacggctctggtggtctgtcca
ttgaataccgttctcaattgggtgaatgaattcgacaaatggcaagaaggcctcaatgac
gacgagaagctggaggttatagaactggcgacggtgaagcgcccccaggaacgggcgtat
atgatgcagcgctggcatgaggacggaggcgttctgattatcggttatgaaatgtacaga
aatctgacccaagggcggaatgtgaagagtaaaaagctgaaggaaatgtaccagaagact
ctggtggaccccggtccggactttgtggtgtgtgatgagggccacattctgaagaacgag
gcttccgccatctctaaggctatgaattccatacggaccaagaggaggatcatcctgacc
gggacccctctgcagaacaacctggtggagtatcactgcatggtgaacttcatcaaggag
aatttactcggctccattaaggaattccgcaatcgatttataaaccccatccagaacggg
cagtgcgccgactccaccatggtggacgtgcgggtgatgaagaaacgtgcccacattctc
tatgagatgttggctggatgtgtgcagagaagagattacacggctctgacgaagttctta
cctccgaagtacgagtacgtcctgtcggtgcgattgtcccccatacagtgtaaactctat
cgctactatctggataatatcacaggtttgtatacaatggaagatccccattttgatagg
agccggcgcagagcattctcagagttagaggtggatgtgtatcacctgccagactctctg
ggaattcggttggctgctaaatattcagaagctggtgttggtaccgtctcggggtctggg
gttggtcctggattcctcagaggcgagagttttccttcccacggagaaaatattctgcca
gcagcagcagaacgtttctcttcacatgattatcatgagatcgggattggtggtaataag
agacggagatcgggattggtggggctcaccaatcgcctcaacgtgggagccgtacccggg
gttaattatggacaaatcaatttcggctcggctcagtctccttacatgcccctaaacctg
ggagcgttgtctgctctgaacaatcagcaactagaagatctcattaaccaaggaagagag
aaggtggtggaagctacaaacagcattgcgtctgccaggatccaacctctggaggacatt
attgccggagtgcggaaggagaatcccacgttgacggaatcccaggctcagtcgctggct
ctaagcaggcaatccacccaggagttggagatcaagagacgcgaggccgtttacaacgat
gttctggccaagcagcagatgttaatcagctgcgtccagcgaatattgatgggccgacgg
ttacagcagcagtacaaccagcagcaacagcagcagatcgctttgcagcaacaagcggca
ttgagccggctgatcatgcagaagtctccaaacatgatccttaacccatctaactatcag
cagatcgacatgcaaggactgtaccaaaatctccagggccaccacctccagagagcccca
gcccctatcagagcgaaatctccgggatcctcccaggggaaaaaaaactga
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integrated database retrieval system