Rana temporaria (common frog): 120922007
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Entry
120922007 CDS
T07929
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04514
Cell adhesion molecule (CAM) interaction
rtem04517
IgSF CAM signaling
rtem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120922007 (F11R)
04517 IgSF CAM signaling
120922007 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120922007 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120922007 (F11R)
04090 CD molecules [BR:
rtem04090
]
120922007 (F11R)
Cell adhesion molecules [BR:
rtem04515
]
Immunoglobulin superfamily
CTX family
120922007 (F11R)
CD molecules [BR:
rtem04090
]
Proteins
120922007 (F11R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
C2-set_2
C1-set
Ig_C17orf99
Ig_PDGFR_d4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120922007
NCBI-ProteinID:
XP_040190472
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All DBs
Position
13:<2608..21943
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AA seq
289 aa
AA seq
DB search
SLYPPPSPPYSSSSLLLSAGTAVLCSPPVNLKEGNNAEFPCNFPSSYQNPRVEWKFMSGN
DAILVYYDGALTAPYKTRATFFPQGLRLSSVTRKDAGEYSCEVTGMVSGSPQLFQDKTQL
VVLVPPSVPIAQVPTSVSTGGTATLYCIETDASPPPTFTWYKNGVLMPPNPKDSPNFQNS
SYAIDATTGQLRISPVTQADVAQYSCQAENSEGKRTSEPVQVAIKDVNVGGIVAAVIVSL
LILGLIAFAVWFAYQRGYIGKKDNKKVIYSQPSETRSDKNFQQTSSFLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
tccctgtacccccccccctcccctccatactcatcatcttctcttcttctctccgcaggg
accgctgttctgtgtagcccccccgtcaacctgaaggaaggaaacaatgcagagttcccg
tgcaattttcccagttcttaccagaacccgcgtgtggagtggaagttcatgtccggcaat
gatgccatcctggtgtactatgatggggcactgacagcaccctataagacccgggcgacc
ttcttcccacaaggcctccggctgagttcggtgacccggaaggacgctggggaatattcg
tgtgaagtgactggaatggtttccgggagtccgcagttgttccaggacaagactcagctg
gtggtgttggttcccccctctgtgcccatcgctcaggtaccaacttctgtcagtaccggg
ggtacggcaaccctttactgcattgagacggacgcctccccaccgccaaccttcacctgg
tacaagaatggtgtcctgatgcccccaaaccccaaggacagccccaacttccagaactcc
agctacgctatcgatgccacaactggacagctgcggatcagtccggtgacgcaggcggac
gtcgcacaatattcctgccaggcagagaattctgaggggaagcgaacctcggagccggtc
caggtggcaatcaaggacgtgaacgttggagggattgtcgccgccgtcatcgtcagcctc
ctgatccttggactcatcgcattcgctgtctggttcgcctatcagcggggatacatcggc
aagaaagacaataagaaagtcatctacagtcagccgtcagagacgcggagtgataaaaac
ttccagcaaacttcctccttcctggtgtga
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