Rana temporaria (common frog): 120922400
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Entry
120922400 CDS
T07929
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II
KO
K06558
macrophage scavenger receptor 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120922400 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120922400 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtem04090
]
120922400 (MSR1)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120922400 (MSR1)
CD molecules [BR:
rtem04090
]
Proteins
120922400 (MSR1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRCR
Collagen
SRCR_2
AIP3
BST2
WEMBL
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
120922400
NCBI-ProteinID:
XP_040190606
LinkDB
All DBs
Position
1:570890333..570932515
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AA seq
430 aa
AA seq
DB search
MARWSKKSENNEDITCFDPIEDRLDNVSQKSLIPPGITTPKNERKLKSAIAAIVLLYIIV
LGLLVATLRLKGQISQFEKYKHICEEKHEGEDGKESETGSLHDYSIILSQLIQNLSDCKS
QFSLNSAKLQSLSKILNESISQSQEKDKRMQDIQKTVGQLTTTLDDSDKKMDYINMTFSE
KVHILKEEIGQQYTYFQNASSDINVVKQQYMTMQQEMKEEVKTLNQITNDLQLKDWEHSL
TLKNLTIIQGPPGQKGEKGDNGLAGIIGRPGPTGPKGPQGYPGRGTKGDSGAKGEKGQKG
EKGEKGEKGEGNSMTVALTTPSTKSEPTVRLIDGSEPHKGRVEVFYNGQWGTICDDHWDD
NDGKVVCKMLGFSGVSKVSNKASFGQGKFRIWMDDVRCTGYESSIAKCNFRGWGITDCTH
AEDAGVECIK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtggtcaaaaaaatctgaaaataatgaagacattacttgctttgacccaatt
gaggatcggttggataatgtgtcacagaagtcccttattccacccggtataactactcca
aaaaatgaaaggaaactgaagtctgcgattgctgccattgttttactttatatcatcgta
cttggtcttctagtagctactctcaggctaaaaggtcagatctcccagtttgaaaaatac
aaacacatttgcgaggaaaagcatgaaggagaagatggcaaagaatcagaaacaggaagc
ctccatgattactccattattttgagccagcttatacaaaacctctctgactgtaaatca
caattttcactgaactcagcaaaactgcaatctctaagtaaaatattaaatgagagcata
tcacagagtcaggaaaaggacaaacgcatgcaggacatacaaaaaacagtaggacagtta
accactacactagatgacagcgacaagaaaatggattatataaacatgacattttctgaa
aaggttcatattctgaaggaggaaattggtcaacagtatacatactttcagaatgcatca
tcagatatcaacgtggtaaaacagcagtatatgacaatgcaacaagaaatgaaagaggaa
gtgaaaacactgaatcagattaccaatgatcttcagttaaaagactgggagcattctctt
acactgaaaaacctaacaataattcaaggtcctcctggtcaaaaaggagaaaagggtgac
aatggcttagcaggaataattggaagaccaggacccacaggaccaaaaggaccgcaaggt
tatccaggacggggaactaaaggtgactcaggtgccaaaggtgaaaagggacaaaaggga
gaaaaaggagaaaaaggagaaaaaggagaaggaaattctatgactgtggccctcacaact
ccttctactaaatcagaacccactgttcgcctcattgatggctctgagcctcacaaagga
agggttgaggtattttacaatggacagtggggcaccatatgtgatgatcactgggatgat
aatgatggaaaagtggtgtgcaagatgctgggattttctggagtttccaaggtttctaac
aaagcatcctttggtcaagggaagttcagaatatggatggatgatgttagatgcactgga
tatgaaagttccattgcaaaatgtaacttcagaggctggggaatcacagattgcacacat
gctgaagatgctggagtggaatgcattaaataa
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