Rana temporaria (common frog): 120922903
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Entry
120922903 CDS
T07929
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
rtem04144
Endocytosis
rtem04510
Focal adhesion
rtem04540
Gap junction
rtem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120922903 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtem01001
]
120922903 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtem04090
]
120922903 (PDGFRA)
Enzymes [BR:
rtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120922903 (PDGFRA)
Protein kinases [BR:
rtem01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120922903 (PDGFRA)
CD molecules [BR:
rtem04090
]
Proteins
120922903 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Ig_6
Kinase-like
Motif
Other DBs
NCBI-GeneID:
120922903
NCBI-ProteinID:
XP_040190780
LinkDB
All DBs
Position
1:complement(577060925..577107230)
Genome browser
AA seq
1091 aa
AA seq
DB search
MACALRTSLILGCFLLIAPLYSYGTNPLPMLFPEKEEMVEQLHNSFLIRCSGESELNWHY
PTKEDGDDNLDIRHEENNSGLFESVLEVKNTSAYHTGVYTCYYNQTQTDDYEIEGMDMYI
YVPDPTVPFVPSAMLDHIIVVEEDESAIIPCRTTDPNSQVTLRNKDMEKNVNAFYDSKQG
FVGNFISGVYICETMVNGVLFKTDDYNLQTWKANINISVEMQAPKTVFRTGETIIISCIV
LDNEVVDLQWNYPGKQRKTGTIKVEESKKPLIRLEYTLTIPNVTEKDSGEYECAVIPATG
EDKEVQKVNVTVHEKGFVTLNPKFRLLEFANLHEVKAFSVEVEAYPAPTVLWLKDNATLN
DSMTEITMSIFRSEEAKYSSRLNLIRVKEEDGGVYTLVVQNDAETKTTSFELQIKVPALI
LQLVDDHHGSSGQQTVECLAKGMPIPDVEWLVCRDIKRCNNDSSWSVLVTNGTEISIETH
QDNENTVESQVIFKKVEETVAIRCIAKNDLGVVARELKLVAPTLRSELTVAAAVLVLLVI
VIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGR
ILGSGAFGKVVEGAAYGLSRSQPVVKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI
VNLLAACTKSGPIYIITEYCFYGDLVNHLHKNRDSFQSRHPEKLKKDLDIFGLNPVDEST
RRYENYVILSFENNGDYMDMKQVDNTQYVPMHEMNEVSKYSDIQRSWYDRPASYKKRPMS
EVKNLFSDEGSEGLTMLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICD
FGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSFGILLWEIFSLGGTPY
PGMVVDSSFYNKIKSGYRMAKPEYATHEVYDIMVKCWNSEPEKRPSFYHLSEIVESLLPA
EYKTCFEKILHDFLKSDHPAVTRMGCETDNSYIGVTYKNENKMKDRENVFDEQRLSADSG
YIIPLPDIDPVSDDESGKRNRHSSQTSEESAIETGSSSSTIVKRDDETIEDIEMMDDIGI
DSSDLVEDSFL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgccctaaggacatccctaattttgggatgcttcctacttattgctccattg
tattcttatggtacgaaccccttgccgatgctctttccagaaaaggaagagatggtagaa
cagttacacaattcctttttaatacgctgcagtggtgagagtgagctgaactggcattat
cccacaaaggaggatggtgatgacaatctagacatccgacatgaagaaaacaacagcgga
ctctttgagtcagtgctagaagtgaagaacacatctgcatatcacacaggagtttacacc
tgttattacaatcaaacccagacagatgactatgagattgaaggcatggacatgtatatt
tatgttccagatcccacagttccctttgttccatctgctatgcttgaccacattattgta
gtggaagaagatgaatctgctatcattccttgtcggacaactgatcccaacagccaagtg
acactgagaaacaaagatatggaaaagaatgtcaatgccttctatgacagcaagcaaggt
tttgttggcaatttcatatcaggtgtctacatttgtgaaaccatggtaaatggggtgctc
ttcaaaaccgatgattacaacttacagacatggaaagccaatataaacattagcgtggaa
atgcaagccccaaaaacagttttcagaacgggtgaaaccatcattatttcttgcatcgtc
ctagataatgaggtggttgacctgcagtggaattacccaggaaagcagagaaaaactggc
actataaaagttgaagaaagcaagaagcctctgataagactggaatatacactgaccatc
ccaaatgttacagaaaaggattctggggaatatgaatgtgcagtcattcctgctacagga
gaagacaaagaagtacagaaagttaatgttacagttcatgaaaaaggatttgtaacacta
aaccctaagtttagactgctggaatttgcaaatctccatgaagtaaaagctttttctgtg
gaggtggaggcgtacccagcaccaacggttttatggttaaaggacaatgccaccctcaac
gacagcatgacagagatcaccatgagcatcttcaggagcgaggaagctaaatattcaagt
agattgaacctcatccgtgtcaaagaggaggatggcggtgtgtacacacttgtagttcag
aatgacgcagaaactaaaacaacttcatttgagctgcaaattaaagtccctgctttgata
ttacaactagtggatgatcaccatggctcatctggtcagcaaaccgtggagtgtctagct
aaaggaatgcccattccagatgtggaatggttggtttgcagggatataaaaaggtgtaat
aatgacagctcctggtctgttttggtaaccaatggtacagaaatcagcatcgagactcat
caagacaatgagaacacagtggagagtcaagtgattttcaagaaggtggaggagactgta
gcaatccggtgtatagcaaagaatgatctcggggttgttgcaagagagctgaaattggtt
gctcctaccctacgctcagaactgacagtggcagctgcggtgctcgttctccttgtgatt
gttatcatatcactcatagtcctagtcatcatatggaagcagaaaccaagatatgagatt
agatggcgagtgattgagtccatcagcccagatggccatgagtatatatacgtagaccca
atgcaattgccctatgactcacgatgggaatttccaagagatggccttgttcttggtcga
atacttggatctggtgcctttggaaaggtagtagaaggagctgcatatggacttagccga
tcacagcctgtggtgaaagttgctgtgaaaatgcttaaacccactgccaggtccagtgag
aaacaagctctaatgtctgaactgaaaatcatgactcatcttggacctcatttaaacata
gtgaacttgttagcagcatgtaccaagtcaggacctatttacataattactgaatattgc
ttttatggggacctggtgaatcatctgcataaaaaccgggatagctttcagagtcgacat
ccagagaagctaaagaaagatctcgacatctttggcctgaacccagttgatgagagcacc
cgaaggtatgaaaactatgtaattttatcttttgaaaataatggtgattatatggacatg
aagcaagttgacaatacccagtatgttccaatgcatgagatgaacgaggtgtctaagtat
tctgatattcagaggtcctggtatgatcgtccagcgtcttacaaaaagaggcccatgtca
gaggtaaaaaaccttttctcagatgaggggtctgagggtttgacaatgctggatttgcta
agttttacctaccaggttgccagaggcatggagttcctagcttcgaaaaattgtgtgcac
cgtgacttggcagctcgaaatgttctgctggcacaaggaaaaatagtcaagatctgtgac
tttggtctggccagagacatcatgcatgactctaattatgtttcaaagggcagcactttt
cttcctgtaaaatggatggcaccagaaagcatctttgataacctctacacaaccctgagt
gacgtgtggtcgtttggcattcttctttgggaaatattttctcttggtggaacaccatac
ccagggatggtcgtggattcttcattttataacaagatcaaaagtggctacagaatggca
aaaccagagtatgctacccatgaagtgtatgacattatggtgaaatgctggaacagcgag
ccagagaagagaccttccttctaccatctgagtgaaattgttgaaagtcttctacctgca
gagtataaaacgtgctttgagaagattctccatgacttcctgaaaagtgaccatccagct
gtaactcgtatgggttgcgaaactgacaattcctacattggggtgacttacaagaatgag
aacaaaatgaaggacagagagaatgtatttgatgaacaaagactcagtgccgatagtggt
tacatcatccctcttccagatattgatcctgtatcagacgatgagtcaggcaagagaaac
agacacagttctcaaacatctgaagaaagtgcaattgagactggatccagcagctcgact
attgtcaagagagatgatgagaccattgaagacattgaaatgatggacgacattggaata
gattcttcagatctagttgaggacagtttcctctag
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