Rana temporaria (common frog): 120922991
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Entry
120922991 CDS
T07929
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120922991 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120922991 (FIP1L1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120922991 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
120922991
NCBI-ProteinID:
XP_040190787
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Position
1:complement(577983075..578098081)
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AA seq
589 aa
AA seq
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MSAGGEVLERMVVSAEMSGSSPVAAVPTSTTSSTTAAATSTVTAGGGGVGDEEEEWLYGE
ENEAAGPDDDEEDITSSHPVTSVEVETTENGVAKPVTETEDDSDSDSDDDDDDVHVTIGD
IKTAPQYGSYGTAPVNLNIKTGGRIYGPAGGKGKGVDLDAPGSINGVPLVEVDLDSFEDK
PWRKPGADLSDYFNYGFNEETWKAYCEKQKRLRMGLEALPVSSATNKITVQQGRTGNSEK
EPVIQTPKPEFTSPTSLFKSNAAPPRKLSGTIDVIGQTTTITRVEGRRRGANESNIQVVT
EQQSPSEVDNFIKPPPPFFPPGAPPTHLPPPPLFPPPPNVSTAPPLIPPPGSGMQLSFSM
QKPSRYGIPITVPPPGFPPPHGGPPPSLIPTIESGHSSGYDGRSTPAFPYGSVSFPHMPG
SGGPWSSMVETSKPWDYYPRRDKERDRERDRERERERDRERERERPRERERERERERERD
HSPSVGAYNSEEERYRYKEYAERPERGYERHRERISREKEERHRERRHREKEESTRHKSS
RSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKDGGSEAAPETESVEASAD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggcggagaggtgctggagcggatggtggtttcggcggagatgagcggctcc
agccctgttgccgccgttccaacctccaccacctcttctacaactgccgccgccaccagc
accgtgaccgcgggcggaggaggagtcggggatgaggaggaagagtggctctatggggag
gaaaatgaagctgcaggaccagatgatgatgaagaggatataaccagctctcatccagta
accagtgttgaagttgaaactactgaaaatggcgttgcaaaaccggtgacagagacagaa
gatgacagtgacagtgatagcgatgatgacgacgacgatgttcatgttactattggagat
attaaaacggcacctcagtatgggagctatggtacagcccctgttaacttgaacattaaa
actggaggtagaatttatggacctgcaggtgggaagggcaaaggagtggatttggatgcc
ccaggcagtattaatggagttccgttagtagaggtggacttggattcctttgaggacaag
ccttggagaaaaccaggtgctgacctttcagattacttcaattatggttttaatgaagaa
acatggaaagcttactgtgaaaaacagaagcgactgcggatgggcctagaagcgcttcca
gtctcttcagctacaaataaaattacagtgcagcagggcagaactgggaactcggagaaa
gagcctgttatacagacgccaaagccagagttcacatcgccaacttcattatttaaatct
aatgctgcacctcccagaaaactctcgggcacaatcgatgtgattggacaaacaaccacc
ataacacgagtagaagggaggcggcggggtgctaatgaaagcaacatccaggtagtcaca
gagcagcagtctccttcagaagtggataatttcatcaagccgccaccaccatttttccct
cctggtgctcctcccactcatctccctccacctccattatttccacctcccccaaatgtc
agcactgcccctccgctaatccctcctccaggatctgggatgcagttatctttctccatg
caaaaaccatctagatatggaataccaattacagtgccaccaccaggtttccctcctcct
catggcggaccaccaccatcactgataccgaccatagagagtggtcactcgtctgggtat
gatggacgatcaacgcctgctttcccatatggtagtgtgtccttcccacacatgcctggt
tctggaggaccatggtccagtatggtagagacatccaaaccttgggactactatcctcga
agagataaagaaagagaccgtgagagggatcgagaacgcgaaagagaacgcgatagggag
cgagaacgagagcgtccacgggaaagggagcgagaacgagagagagagcgagagcgtgat
catagtcccagtgtgggagcctacaacagtgaagaagagcgataccggtataaggagtat
gcagaaagaccagagcggggctatgagcgccacagggagaggattagcagagaaaaggaa
gaacggcatagggaaaggaggcatcgagaaaaggaagagtcaactcgccacaaatcatca
agaagcagcagcaggcgccgtcatgacagcgaagaaggcgacagtcacagaagacacaag
cacaaaaaatccaaacgaagcaaggaaggaaaggatgggggaagtgaggccgcccccgaa
accgaaagtgttgaggcatctgctgattaa
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