Rana temporaria (common frog): 120923784
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Entry
120923784 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120923784
04121 Ubiquitin system [BR:
rtem04121
]
120923784
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120923784
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120923784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
DBD_Tnp_Hermes
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120923784
NCBI-ProteinID:
XP_040190959
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAEGDQKQREIKNAPSFLRANIWEHFGFYEQSGKHELDKSYAVCKICHTKIKYLGNTTNL
RNHVSRFHSEILKPATTTTKALDPEQPKIDAMLQSTLPPNSEKVKRITKAVATFIAKDLR
PYSVVENTGFRYLLKTIEPRYKIPSRSYFTENVIPALYHETKAQIIASMSQATRVAITCD
SWTSVTTESYVTITAHYISKDWQILSHVLQTRAIYESHTGAHLAELLSHVVEEWQLSDKS
VVLVTDNASNMIVAAQVGKFPHVKCFAHTLNLASQRALKVATLSRLLGRVRRISTFFHRS
TRASHCLKEKQKCLGLKNHKLITDVATRWNSAYDMVERFLEQQPAVCATLLSPEVRRGES
DLCTLNETDVSNAEDAVSALKPMKDATMLMSEERNPTVSLIAPINAQLLQSMTDTMGDTP
MIHEIKNSIRTDLQKRYSSEAEKKILHTASALDPRFKGLPFILTDEERLEIFKGVTEEAA
SLEITSDESERTQEDHQVPRRKRTLEEEDSSPIEDNHSPSPPSPPKKARSLLVSLLGQSF
TDTEGTIEPKKTPYAKAEEEMENYCKAPPLPLTEDPLNWWREHEVIFPLLSRLSKQYLCI
PGTSVSAERVFSTAGDVVTAKRSALKPDHVDQLVFLQKNLHVPKC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagaccaaaagcaacgagagataaaaaatgcacctagctttttaagagca
aacatctgggaacattttggcttttatgaacaaagtgggaagcacgaattggacaagtca
tacgctgtgtgtaaaatctgtcacacaaaaattaaatatctagggaatactactaatctg
agaaaccacgttagccgtttccactctgaaatacttaaacctgccaccaccaccaccaag
gcattggacccagagcagccaaaaattgatgcaatgttacagtcaaccttgccgcctaac
tctgaaaaggtgaagagaataacaaaagctgtggcaactttcatagcgaaggacctgcgc
ccttactctgttgtggaaaacactgggtttcggtaccttttgaagacgatagagccgcgt
tacaaaatcccgtcacgaagttacttcacagaaaacgtcatacctgcactctaccacgaa
accaaagctcagataattgcatcaatgagccaagcaactcgagtcgcaataacgtgtgat
tcctggacttctgtcacgacagagtcttatgttacaataacagcacattacattagtaag
gactggcagattttgtcgcatgtactgcaaacaagagccatttatgaatctcacacgggt
gctcatctggcagagctactgtctcatgttgtggaagaatggcagctgtccgataaatct
gtagtgcttgtgaccgacaacgcgtcaaacatgatagttgcagctcaagttggaaaattc
cctcatgtgaaatgcttcgcccacacactgaatcttgcatcccagcgagcgttgaaagtg
gccacactctctaggcttcttggcagagtgcgacggatatccacattctttcaccgcagc
actagagcaagccactgtctaaaagagaaacagaaatgtcttggcttgaagaatcataag
ctgataactgatgtggcaacaagatggaacagtgcatacgacatggtcgagaggttcttg
gaacaacaacctgcagtctgtgccaccttgctgtctccagaagtcagaagaggagagtcc
gatctctgcactctaaacgaaacagatgtgtcaaatgcagaggacgccgtgagtgcatta
aagccaatgaaggatgcaaccatgctgatgtcagaagagcgcaatccaacagtttctctc
attgcccctataaatgcacaacttctccagagcatgacagacacgatgggagacacaccc
atgatccatgagatcaagaattctattagaacagatctccagaagaggtacagcagtgag
gccgagaagaagatccttcatacagcctctgcactggatcctcgctttaagggactgcct
ttcatcctcacagatgaagaaagattggagatatttaaaggagtcactgaggaagctgca
tccttggagattacatcagatgagagtgagaggacacaagaggatcatcaagtgcctaga
agaaaacgaactctggaagaagaggacagttcacccatcgaagacaaccattctccatct
ccaccatctcctcccaaaaaggccagatcgctgctcgtgagtttgctgggacagtctttc
actgacactgaaggtacaatagaacccaaaaagaccccctatgccaaggctgaagaggaa
atggaaaactattgtaaagccccacctctgcctctcactgaggaccctttgaactggtgg
cgtgagcatgaggtcatatttcccctcctttctcggctgtcaaagcaatacttgtgtatc
ccaggtacaagcgtgtctgcagagcgggttttctccactgcaggagatgtggtaactgca
aaaagaagcgccctcaaaccagaccatgtagatcaattggtgttcttacagaaaaatcta
catgttcccaaatgctga
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