Rana temporaria (common frog): 120923859
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Entry
120923859 CDS
T07929
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120923859 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
120923859 (LIMCH1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
120923859
NCBI-ProteinID:
XP_040190969
LinkDB
All DBs
Position
1:complement(586688284..587077234)
Genome browser
AA seq
1641 aa
AA seq
DB search
MQLNQGLIKKINRLPTPIAGLDNVTLFLRGCKELGLKESQLFDPGDLQDTSNRTVRISDC
NRKLRNVLVTVYWLGKAANSCASYSGNHLDLKEFEGLLAQMRKENEEVESPKRRIRDSGY
IDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDQPH
RRLPDVRKDDMSARRVSFGENKIIVPFNQYLPNKGNQTSYLPAPLRKKRVEHDYRKSWST
ATSPLGGERPFSPNHPEAIEEERSEGQNGEDGASSLIKGQLGITEKFKEYFDQQENDLKE
QPLVSEEEEARKLKSLQKVGIKVMPAAKRYSSPKQCAEDHETPEIVLRKESSHPANEDSE
EEEECRMPDIARDDLATRRARMNQPKVSTPFNQYLGSYIAKSKPSQDSSTATTASFKRDG
DKSKEESQYEPVEKEIIQKENLAQRHIDNVSDQEEEEKVPDIQRDDLAKRKTHGSVAQQK
ESLVFGNSSITKADLATWQRLKLSSEESESMTAKQMPSNAKEPKIDATRAASDDFGRRKL
SLQEKRARNKQKFVHFGQVTEIDKKRWDRLCIAKPGEANVSDGIASDITCAKVVISDTAL
NVQTMDTIPVTHLQCEMRCTAEVEKIPDASTVINCPQGPLPDTQRDDMLARRIGTFQKCA
KVGHPSLTTGDNQENIHNGNLKIQKAKVKENKQPLQDDDQLLSKDIFPEVTADMKPNLND
KTETDAVQLNSAEDACKEDTSLQKDRSTPDPEKDDMMVRRISVSQRPPGVTLTHFLPVPF
SLQKTEEKSQILQPKEKPPISSLFMTTITPNNAPQALTTVRSDSPSKTLQQSAAEEPNEL
RDDLMCQPACNPIEDNSICAELKSQPPQETFESPDREVPRFSTQSSLSDDTESVSMCDMR
YEDEGCMLPHSRAHHENLQFVNDLLKEEDDTWQDDLARWKTRRRSASQDLLKKEEERKKM
ERLLSGEPDLSERRKSIKTYKEIVEEKERREKDLHEAYKNARTREEAEKILQKYIERFTI
SEAVLERLVMPKILERSHSVEPGLLSSSEDPNPLKYLRQQSTPSPKFTSTVEATISPTSE
LDFKAPMGPISPTKNVVSKAVPMLTPKPYSQPRNTQHVLKTFKVEGKVSMNGEAMNGTEE
HKEIGSSGVQMFCPSLTRSQMFEGVARVDAPATVLEPDASSIELSLKRPNIQNSIKDKEI
LSGERNCSDVVDGTHSSLPTNVHNEQTAEGITQHNKENPIVTSLEFTPPPEAVVNGKDQE
EEQKVDPKSLSLDFSIKKEKETALHQVKATQDNGQEPLRKEQHGDPESSGSSAVPIPALN
SPSRFCSWDPEEERRRQERWQQEQERLLQERYQKEQEKLKEEWEKAQKEVEEEERKYYEE
EKKIIEDTLMPLTVSPATSLHRGVCEMNGSTTPSHREQETTSEETWTEAKSCVKEAAQPE
DNESQVPLWTLEGALNRPEEQNNGSSRLETEDMVAVTYDNNYTHQQQCNTPTSLRLQFGV
NLESHVAEDVASLNNFVDSKSSQPIRSPCVDSKGLDSPENPRDIINSSQSTSSQGQSPNR
YKRSVSGKKLCSTCGIPLGKGAAMIIETLSLYFHIQCFKCGICKGQLGDATTGADVRIRN
GLLNCNDCYIRSRTAGHPTPL
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaaccaggggcttataaagaagataaaccgattaccaacacctattgctggt
ttggataatgtgacattatttttacggggctgtaaagaacttggcctaaaagaatcccag
ctgtttgacccaggagatctgcaggacacttcgaacagaacagttaggatttcagactgc
aaccggaagctaagaaatgtactcgtcactgtttattggctaggaaaagcggcaaacagc
tgtgcgtcatacagtggaaatcatctggacctgaaagagtttgaaggcttgctggcacaa
atgaggaaggaaaacgaagaggtggagagtcctaaaagacgcatccgtgacagcggatac
attgactgctgggactctgagagaagcgattctctgtccccaccgagacatggcagagat
gattcctttgacagcctggattcatttggttctcgctcacaacagacaccatctccagat
gtggtgctgagagggagcagcgatggaaggggaagcgactcagaatcagaccaaccccac
agaagattacccgatgtcaggaaagatgacatgtctgctcgacgagtatcttttggcgag
aacaaaataatagtgccttttaaccagtaccttcccaacaagggcaaccagacttcatac
ctccccgcacctctgaggaaaaagagagttgagcacgattaccggaaaagttggagtact
gcaacttcaccactagggggagaaaggccattcagccccaaccaccctgaagcaattgag
gaagaacgtagtgaggggcagaatggagaagatggagcctcttcgctgattaaaggacag
ttaggaataactgaaaaatttaaagagtatttcgaccagcaagaaaatgacttgaaggaa
cagccattagtcagtgaggaggaggaggctcggaaattaaaaagccttcaaaaagttgga
ataaaggtcatgcctgcagcaaagcgttacagcagtccaaagcaatgtgcagaagaccat
gaaacgccagagattgtattgcggaaagaaagcagccatccagctaatgaggattctgaa
gaggaagaagagtgtagaatgccagatatcgcgcgagatgacttggcaacacgcagagca
agaatgaaccaacccaaagtttcaacaccctttaatcaatatctaggttcctatattgcc
aaatccaagccttctcaggactcctcgactgcaaccactgcctccttcaaacgtgatggg
gataaaagcaaagaagaaagtcaatacgaacctgtggagaaggagatcattcaaaaggaa
aatttagctcaaagacacatagacaacgtatctgaccaagaggaagaggagaaagtacca
gacattcagagggatgatttggccaagcgtaaaactcatggctcagtcgcacaacagaag
gagtctttggtttttggcaactcctcaataacaaaggctgacttggcaacctggcagaga
cttaagctgtcttctgaagagagtgaaagtatgacagcaaaacagatgcccagcaatgcc
aaggagccaaagattgatgcgacccgagcagccagtgatgactttggtagacgcaaatta
tccttgcaagagaaaagggctcgcaacaaacaaaaatttgtacactttggccaagttact
gagattgataagaagagatgggataggctctgtattgccaaacctggtgaggcaaatgtc
agcgatggaattgcctctgacattacatgtgccaaggtggtcatttcagacactgctttg
aatgttcagacaatggacaccattccagtaacacatctacagtgcgagatgagatgtact
gcagaagttgaaaaaatcccagatgcctctacagtcatcaactgtccgcaaggaccatta
cccgatacccaacgagatgacatgttagcacgacgaataggcacttttcagaagtgtgcc
aaagttggccatccctctcttactactggtgacaaccaggaaaatatacataatggaaat
ttgaagatccaaaaggctaaagtgaaggaaaataaacagccactgcaagatgatgatcaa
ctcctgagcaaggacatatttcctgaagttacagctgacatgaagcctaatttaaatgac
aaaactgaaacagatgcagtacaacttaattcagcagaagatgcatgtaaagaagacacc
agcttgcaaaaggacagaagtacaccagatccagaaaaggatgatatgatggtcagaaga
atctctgtgagtcagagaccaccaggggtaactctaactcacttccttccagtgccattt
tctctacaaaagactgaggagaagtctcaaatccttcaaccaaaggagaagccgcccatc
agctccctattcatgaccacaattactccaaataatgccccccaagcccttaccactgtc
aggtctgacagtccatcaaaaacactccagcagagcgcagcagaagagcccaatgaatta
agagatgatttgatgtgtcaaccagcttgcaaccctattgaggataattccatatgtgca
gagcttaagtcccaaccaccacaggaaacgtttgaaagtcctgaccgtgaagtaccgaga
ttcagcacacagtcgtctctgtcagatgacacagagagtgtgagcatgtgtgacatgaga
tacgaagatgagggatgtatgctgcctcacagcagagctcaccatgaaaacttgcagttt
gtcaatgacctgctcaaggaggaggatgatacatggcaagatgacttggcccggtggaag
actcgcaggagaagtgcatcgcaagacttgctaaagaaagaagaagaaagaaaaaagatg
gagaggttacttagtggggaacctgacttgagtgaaagaaggaaaagcataaaaacttac
aaagaaatagtagaggaaaaagaacgaagagagaaagatttgcatgaggcttacaaaaac
gccaggacgagagaggaagcagaaaaaatactgcagaaatacattgagaggtttaccata
agtgaagctgttcttgaacgtttagtgatgccaaaaattctggagagaagccattcagta
gagcctggcttactctcttcatcggaggaccctaacccattgaagtatctgagacagcag
tctacgccttctccaaaatttacttctacagtagaagcaactatatctcctacttctgaa
ttggactttaaagcacccatgggtcccatatcaccaacaaaaaatgtggtctcaaaggca
gtgcctatgttaacacctaagccttattcccagcccagaaatacacaacatgttctcaaa
actttcaaggtagagggaaaagtgagtatgaatggagaggcaatgaatggcacagaggaa
cacaaggaaattggatcaagtggagtccaaatgttttgtccatcactgaccagatcacag
atgtttgaaggtgtagccagagtggatgcaccagcaacagtgttggagccagatgcgtca
tccattgaacttagtttgaaaaggccgaatatacaaaattctatcaaggacaaagaaatt
ttgtctggtgaaagaaattgcagtgatgtggttgatggaacacattcatctttgcctacc
aatgtccacaatgagcagacagctgaaggtataacacagcataataaggaaaacccaatt
gtcaccagcttagagttcacaccaccgcctgaagctgtcgtaaatggaaaagaccaagaa
gaggaacaaaaggttgatcccaaatcactgtctctggatttcagcatcaagaaagaaaaa
gaaactgcattgcatcaagtgaaagcaacacaggacaatggacaagagccactgcggaaa
gaacagcatggagatccagaaagcagcgggagctcagcagtaccaatacccgctttaaat
tctccatcgcggttttgttcttgggatccagaagaagagcgaagacgacaggagcggtgg
cagcaggagcaggagaggctgctacaggagagataccagaaagagcaggaaaagctaaag
gaggaatgggaaaaagctcaaaaagaggtggaagaggaggaacgtaaatattatgaggag
gagaagaaaatcatcgaagacaccttaatgccattgacagtttcccctgctacaagttta
catcgtggtgtatgtgagatgaatggaagcacaactcccagccacagagagcaagaaaca
acctctgaagagacttggacagaggccaaaagctgcgtgaaagaggcagcacagccagaa
gataatgaatcgcaagtgccgttgtggacactggagggagctctcaatagaccagaagag
cagaataacggaagcagcagattggaaacagaagacatggtggcagtgacatatgacaac
aactatacacaccaacaacagtgcaatacacccaccagccttcgcttacaatttggtgta
aatttggaatcccatgtggctgaggacgtggcatctcttaataattttgtggatagtaaa
agcagtcagccgattagatcgccctgtgtagattcaaagggactggattctccagagaac
cccagggatatcatcaattcctcacagtctacttcttcacaaggccagtcacccaacagg
tacaaaaggtctgtaagtggaaagaaactttgttccacatgtggaataccacttggaaag
ggggcagccatgatcatcgaaactcttagtctatatttccacatacagtgtttcaagtgt
gggatttgtaagggacaacttggtgatgcaacgacaggagcggatgtcaggattcgcaat
ggcctattaaactgtaatgattgttacatcagatccagaacggctggacaccctacacca
ttgtga
DBGET
integrated database retrieval system
