Rana temporaria (common frog): 120924317
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Entry
120924317 CDS
T07929
Symbol
SLIT2
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 2 protein
KO
K06839
slit 2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtem00536
]
120924317 (SLIT2)
Glycosaminoglycan binding proteins [BR:
rtem00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120924317 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
EGF_TEN
LRR_1
LRR_14
LRRCT
hEGF
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_C8A_B_C6
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120924317
NCBI-ProteinID:
XP_040191132
LinkDB
All DBs
Position
1:complement(606837640..607234780)
Genome browser
AA seq
1530 aa
AA seq
DB search
MFVGFVKKKMCGVGFWKLSISVGLVLVILSEVAPQPCPTQCTCSGTTVDCHGLSLRSVPR
NIPRNTERLDLNGNNLTRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELDRLRLN
RNNLQVFPELLFLTTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDFNQISCIEDGSF
RALRDLEVLTLNNNNITRLSVASFNHMPKLRIFRLHSNNLYCDCNLAWLSDWLRQRPRVG
LYTQCMGPTHLRGHNVAEVQKREFICTGQQSFTVSSCSLLHCPVACTCSNNIVDCRGKGL
TEIPTNLPETITEMRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITELPQSVFEGLFSLQLLLLNANKINCLRVGAFQDLHNLNLLSLYDNKLQTI
AKGTFAPLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQI
KSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELR
LNNNEFTVIEATGIFKKLPQLRKINLSNNKITDIEEGAFEGANGVNELILTSNRIENVHH
KIFKGLDGLKSLMLRSNHISCVNNDSFTGLSSVRLLSLYDNQIVTVAPGAFDTLHSLSTL
NLLGNPFNCNCHLAWLGNWLRKKRIVTGNPRCQKXYFLKEIPIQDVAIQDFTCDDGNDDN
TCSPLARCPAECTCLDTMVRCSNKGLKALPKGIPKDVTELYWNGNQFNLVPKELSNYRHL
TLIDLSNNKISTLSNHSFSNMTQLLTLILSYNRLRCIPLRAFSGLNSLRLLSLHGNDVSS
VPQGAFNDLSSLSHLAIGANPLHCDCNLQWLSEWVKSEYKEPGIARCAGPGDLAEKLLLT
TPSKKFTCHGPVDVNILAKCNPCLSNPCKNEGTCNNDPVDFYRCTCPYGFKGQDCDVPIH
ACISNPCKHGGTCHLKEGDKDGYWCTCSDGFEGENCEVNIDDCEDNDCENNSTCVDGVNN
YTCLCPPEYTGELCEEKLDFCSQEVNPCLHDSKCILIPKGYKCDCTPGYVGEHCETDYDD
CQNNKCRNGARCTDAVNGYTCVCSDGFSGLFCEYPPPMVLPRTSPCDNFECLNGAECIVK
GTDPSCQCVSGYQGSKCEKLTSVNFVNKESYLQMSSMRIRAQTNISVQVATDEDSGILLY
KGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGHFHTVELVSLDQTLSLIVDGG
NPKTITNLSKQSSLGFDSPLYIGGMPLKNNVAVLRQAPGQNGTSFQGCIRNLHVNNDLQD
FKKFNLPTGIVHGCEPCHKKLCVHGTCLATSPSGFTCECEGGWSGPLCDQQSNDPCLGNK
CVHGTCLPINAFSYSCKCSSGYGGVLCDEIEEQFNPCQSVKCKHGKCRISGLGKAYCECN
SGYTGDSCDKEISCRGERIRDYYQKQQGYAACQTTEKVSRLECRGGCSNGQCCGPLRSKR
RKYVFECTDGSSFVDEVDKVIKCGCTKCPS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgggatttgtgaagaagaaaatgtgtggcgtaggtttctggaagctttccatc
tcggtggggttggtgttggtgatcttgagcgaggtggcacctcaaccgtgcccgactcag
tgcacttgtagtgggaccacggtggactgccatgggttatctttgcgtagcgtgccacgc
aacattccccggaacacggaaaggctagatttgaatggtaacaatctcacaagaataaca
aagacagactttgcaggtctgcgtcatcttcgtgttttgcagcttatggagaacaagatt
agcaccattgaaaggggagcgtttcaagatctgaaagagctggatagattacgtttgaat
cgaaataatcttcaggtgtttccggaattgcttttcctgacgactccgaagctctacaga
ctagacctcagtgaaaaccagatccaggccatcccaagaaaggcgttccgtggagcggta
gatattaaaaatctgcaactggattttaaccagatcagctgcattgaagatgggtctttc
cgagctctgcgcgacctggaagtgcttaccctcaacaataacaacatcactcgactttca
gtggcaagcttcaaccacatgccaaaactgcgaatttttcgacttcactccaacaactta
tactgtgactgtaatctggcctggctatcagactggctgcggcagaggccccgtgtcggc
ctgtacactcaatgtatgggacctacccacctgagaggacacaacgtggctgaagttcag
aagcgggaattcatatgtacaggtcagcagtccttcacggtatcttcttgcagtctcctg
cactgcccggttgcctgcacctgcagtaataacattgtggattgccgaggaaaaggattg
actgagatccctaccaacctgcctgagaccatcaccgaaatgagattagagcaaaactca
atcaaggtcatacctccaggggctttctcaccgtataaaaaactacgaagaattgattta
agcaacaaccagatatcggaaattgctccagatgcatttcaaggcctgcgttccctcaac
tccttggttctctatggaaacaaaatcacagagctccctcagagtgtgtttgaaggcctg
ttttcattacagctactattgctcaatgccaacaagataaattgtctgcgggtaggtgct
ttccaggatctccacaacctgaaccttctgtctttgtatgacaacaaacttcaaaccatt
gccaagggcacattcgctcctcttcgtgccattcaaacactgcatttggctcagaaccca
tttatctgtgactgccatctgaagtggctggcggattatcttcatacaaaccctattgag
accagtggtgcccgctgcaccagcccccgccgactggcaaacaaaagaatcgggcagatc
aaaagcaagaaattccgctgttcaggtacagaagactacaggtccaaactaagtggagat
tgttttgctgacctggcatgtccagagaagtgtcgttgtgaaggaactactgtagactgt
tcaaaccagaagctcaataaaatcccagatcacattcctcagtacacagctgagctgcgt
ctcaataataatgagtttacagttatagaagcaactggaatctttaagaagctcccacag
ctgcggaaaataaatctaagcaataacaagattactgatattgaagaaggagcctttgag
ggagccaatggagtgaatgagctcatcctgacaagcaaccgaatagagaatgttcaccat
aaaatttttaaaggcctggatggactaaaatctctgatgctgagaagtaatcacattagc
tgtgtgaataatgacagttttactggcctgagctctgtgcgattactttctctgtatgac
aatcagattgtcacagttgcccctggagcattcgacacattgcattccctgtctacactg
aaccttctggggaacccatttaactgtaactgtcacctggcctggctgggaaactggctt
aggaagaaacgtattgtgactggaaatccaagatgccaaaaancatacttcctgaaggag
attcccatacaagatgttgcaatacaggactttacctgtgatgatggcaatgatgacaac
acttgctcaccactcgctcgttgcccagcagaatgtacctgcttagatacaatggttcgc
tgcagtaacaaaggactaaaagcattacctaaaggcattcctaaggatgtcacagagctg
tactggaatggaaatcagtttaaccttgtcccgaaggagctgtccaattataggcacttg
acacttattgacctgagcaataacaagatcagcactttgtccaatcatagcttcagcaat
atgacacagcttctcaccttgattctaagttacaatcgactaagatgcattcctctacgg
gctttcagtggacttaattccctaagactcctatccctccatggaaatgatgtatcctct
gtaccacaaggagcattcaacgacctctcctctctgtcacacttggccatcggggcaaac
cctctgcactgcgactgtaacttgcaatggttgtcagaatgggtgaagtctgaatacaag
gaacctggtattgctaggtgtgctggacctggggacctggcagaaaaacttcttcttact
actccatccaaaaagttcacgtgtcatggaccagtggatgtcaacattcttgccaaatgt
aacccatgtttatcaaatccctgcaaaaatgagggcacctgcaacaatgacccagttgac
ttctatcgctgtacatgtccctatggctttaagggtcaagactgtgatgtacctattcat
gcttgtatcagcaacccatgtaaacatggaggaacttgccacttgaaggaaggagataaa
gatggatattggtgtacctgttcagatggctttgaaggtgaaaactgtgaggtgaacatt
gatgactgtgaagataatgactgtgagaataattccacttgtgtggatggagtcaacaac
tacacctgcctctgtccaccagaatacacaggagaactatgtgaagagaagctggatttc
tgctcccaggaagtaaacccatgtctacacgactccaaatgcatcttgataccaaaggga
tacaaatgtgactgcactccaggatacgttggtgagcactgtgaaactgactatgatgac
tgccaaaacaacaagtgtcggaatggtgcgcgttgtacggatgccgtgaacggctatacc
tgtgtgtgttcagatggcttcagtggactcttctgtgagtacccaccacccatggtctta
cctcgtacaagtccctgtgataattttgagtgtctgaatggagcagaatgcattgtgaaa
ggcactgacccctcgtgtcagtgtgtgtcgggatatcaagggagcaagtgtgagaaacta
acaagcgtcaactttgtaaacaaggaatcttacctgcaaatgtcatcgatgaggatccgc
gcacagaccaatatctcagtgcaggtggctacagatgaagacagcggcatcttgctctac
aagggtgacaaggaccacatagcagtggagctgtacagaggaagagtacgtgttagctat
gacactggaagctacccagcatctgccatttacagcgttgagacgataaatgatggccac
tttcacaccgtggaacttgtaagcctggatcaaacgctgtcactgatagtggatggagga
aaccctaagaccatcactaatttgtcaaaacaatcctctctcggcttcgactctccgcta
tatataggaggtatgcctttgaaaaacaatgttgctgttttgcggcaagctcctggacag
aatggaaccagctttcaaggctgcatccggaacctgcatgtaaacaacgatctacaagac
tttaagaagttcaatctgccgactggaattgttcatggttgtgagccatgccacaagaag
ttatgcgtgcatggaacttgtctggccacaagtccgtctgggttcacttgtgagtgtgaa
ggaggctggtcaggacctctctgtgatcaacagtccaatgacccttgtctgggaaataaa
tgtgtacatggcacctgcctgccgatcaatgcattttcctacagctgtaaatgttcctca
ggctatggtggagttctgtgtgacgaaattgaagaacagtttaacccttgccagtctgtt
aaatgtaaacatggcaaatgccgaatctcaggccttgggaaagcctactgtgagtgcaac
agtggctataccggagacagctgtgataaagaaatctcttgccgaggggaacggatcaga
gattattaccaaaaacagcaaggttatgcagcttgccagacgaccgagaaggtatcgaga
ctagaatgcagaggaggctgctccaatggtcagtgctgcggacccctgagaagcaagaga
cggaaatatgtttttgagtgcaccgacggttcctcatttgtggacgaagtcgataaagtc
ataaagtgtggctgtacaaagtgcccctcctaa
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integrated database retrieval system
