Rana temporaria (common frog): 120924682
Help
Entry
120924682 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120924682
04121 Ubiquitin system [BR:
rtem04121
]
120924682
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120924682
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120924682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_12
hAT-like_RNase-H
DBD_Tnp_Hermes
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120924682
NCBI-ProteinID:
XP_040191615
LinkDB
All DBs
Position
1:682715021..682719364
Genome browser
AA seq
646 aa
AA seq
DB search
MAEVEQKEREIKNAPSFLKANIWEHFGFYEKSGKHELDKSYAVCKICHTKIKYLGNTTNL
RNHVSRFHPEMLKPTTTTTTKEMNPDQPKIDAMLQSTLPPNSEKVKRITKAVAAFIAKDL
RPYSVVENSGFRYLLKTIEPRYKIPSRSHFTENVIPALYHETKAKIIASMSQASRVAITC
DSWTSVTTESYVTITAHYVSKDWQILSHVLQTRAIYESHTGAHLAELLSHVVEEWQLSDK
SVVLVTDNASNMIVAAQVGKFPHVKCFAHTLNLASQRALKVATLSRLLGRVRRISTFFHR
STRASHCLKEKQKCLGLKNHKLITDVATRWNSAYDMVERFLEQQPAVCATLLSPEVRRGE
SDLCTLNETDVSNAEDAVSALKPMKDATMLMSEERNPTVSLIAPINAQLLQSMTDTMGDT
PMIHEIKNSIRTDLQKRYSSEAEKKILHTASALDPRFKGLPFILTDEERLEIFKGVTEEA
ASLEITSDESERTQEDHQVPRRKRTLEEEDSSPIEDNHSPSPPSPPKKARSLLVSLLGQS
FTDTEGTIEPKKTPYAKAEEEMENYCKAPPLPLTEDPLNWWREHEVIFPLLSRLSKQYLC
IPGTSVSAERVFSTAGDVVTAKRSALKPDHVDQLVFLQKNLHVPKC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtagaacaaaaggaacgagagataaaaaatgcacctagctttttaaaagca
aacatctgggaacattttggcttttatgaaaaaagtgggaagcacgaattggacaagtca
tacgctgtgtgtaaaatctgtcacacaaaaattaaatatctagggaatactactaatctg
agaaaccacgtcagccgttttcacccagaaatgctaaaacctaccaccaccaccaccacc
aaggaaatgaacccagatcagccaaaaattgatgcaatgttacagtcaactttgccgccc
aactctgaaaaggtaaagagaataacaaaagctgtggcagctttcatagcgaaggacctg
cgcccttactctgttgtggaaaacagtgggtttcgctaccttttgaagacgatagagccg
cgttacaagatcccgtcacgaagtcactttacagaaaacgtcattcctgcactctaccac
gaaaccaaagctaagataattgcatcaatgagccaagcaagtcgagtcgcaataacgtgt
gattcctggacttcagtcacgacagagtcttatgttacaataacagcacattatgttagt
aaggactggcagattttgtcgcatgtactgcaaacgagagccatttatgagtctcacacg
ggtgctcatctggcagagctactttctcatgttgtggaagaatggcagctgtccgataaa
tctgtagtgcttgtgaccgacaacgcgtcaaacatgatagttgcagctcaagttggaaaa
ttcccccatgtgaaatgcttcgcccatacactgaatcttgcatcccagcgagcgttgaaa
gtggccactctctctaggcttcttggcagagtacgtcggatatccacattctttcaccgc
agcactagagcaagccactgtctaaaagagaaacagaaatgtcttggcttgaagaatcat
aagctgataactgatgtggcaacaagatggaacagtgcatacgacatggtcgagaggttc
ttggaacaacaacctgcagtctgtgccaccttgctgtctccagaagtcagaagaggagag
tccgatctctgcactctaaacgaaacagatgtgtcaaatgcagaggacgccgtgagtgca
ttaaagccaatgaaggatgcaaccatgctgatgtcagaagagcgcaatccaacagtttct
ctcattgcccctataaatgcacaacttctccagagcatgacagacacgatgggagacaca
cccatgatccatgagatcaagaattctattagaacagatctccagaagaggtacagcagt
gaggccgagaagaagatccttcatacagcctctgcactggatcctcgctttaagggactg
cctttcatcctcacagatgaagaaagattggagatatttaaaggagtcactgaggaagct
gcatccttggagattacatcagatgagagtgagaggacacaagaggatcatcaagtgcct
agaagaaaacgaactctggaagaagaggacagttcacccatcgaagacaaccattctcca
tctccaccatctcctcccaaaaaggccagatcgctgctcgtgagtttgctgggacagtct
ttcactgacactgaaggtacaatagaacccaaaaagaccccctatgccaaggctgaagag
gaaatggaaaactattgtaaagccccacctctgcctctcactgaggaccctttgaactgg
tggcgtgagcatgaggtcatatttcccctcctttctcggctgtcaaagcaatacttgtgt
atcccaggtacaagcgtgtctgcagagcgggttttctccactgcaggagatgtggtaact
gcaaaaagaagcgccctcaaaccagaccatgtagatcaattggtgttcttacagaaaaat
ctacatgttcccaaatgctga
DBGET
integrated database retrieval system
