Rana temporaria (common frog): 120925562
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Entry
120925562 CDS
T07929
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04137
Mitophagy - animal
rtem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120925562
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120925562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120925562
03009 Ribosome biogenesis [BR:
rtem03009
]
120925562
04131 Membrane trafficking [BR:
rtem04131
]
120925562
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120925562
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120925562
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120925562
Membrane trafficking [BR:
rtem04131
]
SNARE
SNARE associated proteins
Others
120925562
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120925562
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120925562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Viral_helicase1
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
120925562
NCBI-ProteinID:
XP_040191965
LinkDB
All DBs
Position
1:complement(25556277..25624768)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGSDPKADDLSTAILKQKSRPNRLIVDEAINEDNSVVSLSQGKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPLD
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLSEDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
TGPSQGAGGSAGGNHFAEEEDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggatcagaccccaaagcggatgatttatccacagctattctgaagcagaag
agccgacccaatcggttaattgtagatgaagcgatcaatgaagacaacagtgtagtctct
ctgtcccagggtaagatggatgagctgcagcttttccgtggcgacacggtccttctgaaa
ggaaagaaaaggcgagaagctgtgtgcatcgtcctgtctgatgacacttgctctgatgag
aagatccggatgaacagggtggtccgtaataatctgcgcgtcaggcttggggatgtcatc
agcattcagccatgcccagatgtgaagtatggtaaacggatccatgtcttgcctctcgat
gacacagtggaaggaatcacaggaaatctctttgaggtctatctgaagccttacttcctt
gaggcctacaggcccatcagaaaaggtgacatatttctggtcagaggtgggatgcgtgcc
gtggagtttaaggtggtggagacagatcccagtccgtactgtatagtcgctccagatact
gtgatccactgtgaaggagaacccattaaacgtgaggatgaggaagagtctctgaatgaa
gtgggttatgacgatatcggaggctgcagaaaacagttggcacaaatcaaggagatggtg
gagctcccgctgaggcaccctgccctctttaaggccattggcgtgaagcctccacgtggt
atcctgctgtacggacccccaggaactggaaaaaccctgattgctcgagctgtagctaat
gaaactggcgccttcttcttcctcatcaatggtcctgagattatgagtaaattggctggt
gagtctgaaagcaacctgcgcaaagccttcgaggaagcagagaagaatgcccccgccatt
atctttattgatgaactggatgccattgctcccaaaagagagaagacccatggagaggtg
gagcgtcgtattgtgtctcagctgctaacccttatggatggtttaaaacaaagagcacat
gtcattgtcatggctgccaccaaccgacccaacagcattgatccagcacttcgacgtttc
gggcgctttgacagagaggttgatatcggaattcctgatgctactggaaggctggaaatt
cttcaaatacacaccaaaaacatgaagctgtctgaagacgtggatctagaacaggtagca
aatgagacccatggtcatgtcggtgctgatcttgctgcgctgtgctctgaagccgctctc
caggccatccgtaagaagatggacctcatagacttagaagatgaaaccatagatgctgaa
gtgatgaattcattggctgtcactatggatgacttcaggtgggcacttagtcagagtaac
ccatcagcactgcgtgagacagtggtggaggtgccacaggttacctgggaggatattggt
ggcttagaagatgttaagagggagctgcaggaattggtacagtatcctgtggagcatcca
gacaaatttttgaagttcggcatgacgccatctaaaggtgttcttttctatgggccacct
gggtgtggtaagactttgttagccaaggccattgccaatgagtgccaggccaattttatc
tccatcaagggccctgagctgctcaccatgtggtttggagaatctgaagccaacgtcaga
gagatctttgataaggctagacaggccgctccatgtgtcctcttctttgatgaactggac
tccatcgccaaggcccgtggtgggaatgtcggtgatggtggtggagctgctgacagagtc
atcaaccagatcttgactgagatggatggaatgtccaccaaaaagaacgtcttcatcatt
ggagccacaaacagacctgacatcattgaccccgccatcctgcgtcctggccgtctggat
cagctcatctacattccactacctgatgagaagtcccgcatttccatcctaaaggccaac
ctaaggaagtctcctgttgccaaggatgtggacgtggatttcctggccaagatgaccaat
ggtttttctggtgctgatctgactgagatctgtcagcgggcctgcaaactggcaatccgt
gaatccattgagaatgagatcaggagagagcgggagagacagacaaacccttcagccatg
gaggtggaagaggatgaccctgtacctgaaatccgccgggatcactttgaggaagctatg
cgctttgctcgccgttccgtcagcgataacgacatcagaaaatatgaaatgtttgcacag
actttgcagcaaagccgcggctttggaagtttcagattcccctccggaaatcagggagga
accggtccaagccaaggagctggaggcagcgctgggggaaaccactttgctgaagaagag
gacgatctgtatggctag
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