Rana temporaria (common frog): 120926653 Help Entry 120926653         CDS       T07929                                  Symbol LIG3 Name (RefSeq) DNA ligase 3   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism rtem  Rana temporaria (common frog) Pathway rtem03410   Base excision repair Brite KEGG Orthology (KO) [BR:rtem00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     120926653 (LIG3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rtem03400]     120926653 (LIG3) Enzymes [BR:rtem01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      120926653 (LIG3) DNA repair and recombination proteins [BR:rtem03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      120926653 (LIG3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C RNA_ligase BRCT_2 mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  120926653 NCBI-ProteinID:  XP_040192710 LinkDB All DBs Position 2:253900218..253944611 Genome browser AA seq 987 aa AA seqDB search MKGLFKLLVLQTARTFSLLSSRSISNTTTPFLHYCSRLPRLHTLQLDFALRISGCHNMAE QRYCVEYAKRGTAGCKKCKEKIAKGMVRIGKIVPNPFSESAGDMKEWYHIKCMFEKLERA RATTKKIDDLTELEGWQELQDPERELITQHVNELATKAGAAPTPRKKTPSKANQPPTPSA TPSKMPAPSPSPLKFSGFSAKPEPSSSAPSSSSGSSLSVEKCDPKHKDCLLREFRKVCAM VAEQPSYNSKTQIIQDFLTKGTSGDGFHGDTFLTIKLLLPGVIKSVYNLNDKQIVKLFSR IFNCNLEEMVRDLEQGDVSETVRIFFEESKTFPPASKSLLTIQEVDDLLNQLSKMTKEED QQKVLEDIACRCTSNDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYDAFKASRNLGDVVE RVLQNQQQAPGMKRTLSVKATLMTPVQPMLAEACKSVEYAMKKCPNGMYAEIKYDGERVQ VHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPKAFPGGTSIILDSEVLLIDTKTGKPLPFG TLGVHKKAAFLDANVCLFVFDCIYFNGVNLMDRPLVERRKFMRENMVEIPNHILFSEMKH VTKASDLADMITRVIREGLEGLVLKDVKSVYEPGKRHWLKVKKDYLNEGAMADTADLAVL GAFYGKGANGGIMSVFLMGCYDTESGKWCTVTKCSSGYDDATLARLQKELDMVKISKDPS KIPSWLKINKNYYPDFIVRDPENAHIWEITGAEFSKAEAHTAGGISIRFPRCTRFRDDKD WKTATTLQQLKELYQVSKEKCDFTVAATSSQDEEGSSECSSRDNEGNSRPPTPSGSVKKP KNPTSKPPGKDKRNDGGKIPQPKKKDEPAKAEKRKIVSPPSVDSKKPKLSSASNGNGHSV APQPSSTTKTLLDIFTGVRLYLPASLEEFPKLRRYFVAYDGDLVPEFDVSSATHVMGDIP ECAEDAKPVTPRWIWECIRRRRLVAPC NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atgaaaggattatttaaacttttagttcttcaaacggcaaggacattttcacttctgtcg tcaaggagcatttcaaacactactactcccttccttcattactgctcaagattacctcgt ctccacaccttacagctagactttgctttaagaatcagtggctgccacaacatggcagag cagcgatattgtgtagaatatgccaagcgtgggactgcaggctgcaagaaatgcaaagaa aagatagcaaaaggcatggtacgaattggaaaaatagttccaaatccttttagtgaatca gcaggagatatgaaggagtggtatcatatcaagtgcatgtttgagaagttggagcgtgca cgggcaaccacaaaaaagattgatgacctcacagagcttgaaggctggcaagagctacag gatcctgaaagagaactgatcactcagcatgtgaacgaacttgctactaaagctggagct gcaccaacacctcgaaaaaagactccttcaaaggccaatcaacccccaacaccaagtgca actccatcaaaaatgcctgcaccaagtccttcacctttaaagttttctgggttttcagca aagcctgaaccctcatcatctgcacccagttccagtagtgggtcaagtctctctgtagaa aaatgtgatccaaaacacaaggactgcctactgcgtgaattccgcaaagtgtgtgccatg gttgcagagcagccaagctataattccaagacccagatcattcaggatttcctaacaaag ggaaccagtggagatggtttccatggagatacattcttgacgataaaactgctgctacca ggtgttatcaagagtgtgtacaacctcaacgataaacaaattgtcaagctctttagtcgt atatttaactgcaacctagaggaaatggttcgagaccttgagcagggagatgtgtcggag actgttcggattttctttgaagaaagtaaaacctttccaccagcttctaagagtctcttg acaattcaagaagtagatgaccttctgaaccaactttctaaaatgaccaaagaagaagac cagcagaaagtactggaggacattgcatgcagatgtactagtaatgatctgaagtgcatc attcggctgatcaagcacgatttgaaaatgaattcaggagccaaacatgtacttgatgct cttgatcctaatgcatatgatgcatttaaagcttctcgcaatttgggagatgtggtggaa cgtgtgctacaaaaccagcagcaggcaccaggcatgaaacgcacactaagcgtaaaagct acgcttatgacgcctgttcaacctatgttggctgaagcctgcaaatctgtggagtatgct atgaagaaatgtccaaatggaatgtatgcagagataaagtacgatggagaacgagtccaa gtgcacaaaaatggtgatcacttcagctattttagccgtagcctgaagccagttcttcca cacaaggttgctcatttcaaagactatatacccaaagcatttcctggtggaactagcata atcctggactctgaagtgcttcttattgataccaagactggtaaaccccttccatttgga accttgggtgttcacaagaaagctgctttcttggatgccaatgtatgcctctttgttttc gactgcatatatttcaatggagttaacctaatggacaggccgttggttgagagacggaag tttatgcgtgaaaatatggtggaaatccccaaccatattctgttctcggaaatgaaacat gtcacgaaagcatcagatttggcagacatgataactcgagtaatcagggaaggtttagaa ggccttgtgctaaaagatgtaaagtcagtttatgagccaggaaaacgtcactggctgaag gtcaaaaaggattatttgaatgaaggcgctatggccgacactgctgatcttgcagttttg ggagcgttttatggaaaaggagcaaatggtggtataatgtctgtattccttatgggatgt tatgacacagaaagtggcaagtggtgcacagtgacaaagtgctcaagtggttatgatgat gcgacgcttgcccgtttacagaaggagctggatatggtcaagatcagcaaggatccatct aaaattccttcatggctgaaaatcaacaagaactattacccagacttcatagttagggat cctgagaatgcccatatctgggagatcacaggagcagagttctctaaggcagaggcccac acagctggtggaatttctattcgttttccacgttgcacccgcttccgtgatgacaaagac tggaaaacggccaccactttacaacagctaaaggaactttatcaggtctcaaaggagaag tgtgatttcactgttgctgccacatcatctcaagacgaggaaggctcttctgagtgcagc agtcgggacaatgaaggaaattccagaccacctacgccaagtggctctgtaaagaagcca aaaaacccaacttctaaaccgcctggcaaagataaaagaaatgatggtggcaaaattccc cagccaaagaaaaaagatgaaccagctaaagcagagaagaggaaaattgtatcgcctcca tccgttgacagtaaaaagccaaaactctccagtgctagtaatgggaatgggcatagtgtg gcaccacagccatcatccaccactaaaacccttttggatatattcacaggagtgaggctt tatctgcctgcttcacttgaggaatttccgaaattgcgccgctactttgttgcctatgac ggtgatctcgtcccagaatttgatgtttcttctgccacacatgtgatgggtgacattcct gaatgtgctgaggatgctaaacctgtgacaccacgttggatatgggaatgcattaggcgc aggaggctagtagcgccttgctga

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