Rana temporaria (common frog): 120926700
Help
Entry
120926700 CDS
T07929
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120926700 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120926700 (MYO5B)
04131 Membrane trafficking [BR:
rtem04131
]
120926700 (MYO5B)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120926700 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120926700 (MYO5B)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120926700 (MYO5B)
mRNA cycle factors
P-body specific factors
120926700 (MYO5B)
Membrane trafficking [BR:
rtem04131
]
Others
Actin-binding proteins
Myosins
120926700 (MYO5B)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120926700 (MYO5B)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120926700 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
nSTAND3
Ac76
AAA_22
Motif
Other DBs
NCBI-GeneID:
120926700
NCBI-ProteinID:
XP_040192790
LinkDB
All DBs
Position
1:39949984..40364617
Genome browser
AA seq
1844 aa
AA seq
DB search
MSVYELYSRYTRVWIPDQDEVWRAAEIIKDYKEGDKKLHLKLEDETVIEFPVTATSLPHL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGED
VIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFAT
VGGSASETNVEDKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTY
LLEKSRVVFQAEEERNYHIFYQLCASSRLPEFADLSLTQAEDFFYTSQGGETAIDGVDDA
DDFDKTRQAFTLLGVKESHQMTIFRIIASILHLGNVQILSERDGESSSLEKEDEHLNHFC
TLLGVEHDQMAHWLCHRKLVTTSETYVKNMAVQQAVNARNALAKHIYAQLFNWIVHHVNK
ALHTTIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQ
IPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQHFKKPR
MSNISFIIVHFADKVEYQCDGFLEKNRDTVYEEQINIFKASKYQLVADLFHDEKDAVPPT
PTGKSKINVRPLKPAMKNANKEHKKTVGHQFRNSLKLLMETLNATTPHYVRCIKPNDEKL
AFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMSKKELSLSDKKLIC
KNVLEHLIKDPDKSQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRLKYR
RMKIASVTIQRYVRGHLARRLVQHIRKTKAAICFQKQFRMIRIYRVYQTMRRAAITIQSY
ARGMVDRRAYRELLQQHKVTIIQKNLRGWMVRKQFVKFRCAAIVIQCYFRRMMARRELKK
LKIEARTAEHFKKLSVGMENKVVQLQRKIDEQNKDYKDLKEQLVTVTTSRSTEVEKLQKE
LERQRQNQQDDNQLASLQEEIEALRAELESSRDERKIVEDSYMSEKQQLQQRISELEDEN
SHLKEEKEELNQRILLHSEDEFTQSEGVKENLQTQKDLEEERARYQNLVKEYTRLEQRYD
NLREEVTLIKQTPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTIMEVEEVGLEKAAMD
MTLFLKLQKRVRELELERKKLQNQLEKKEKEKEQEENNKPQVIETSNDTDRDTDIAYNNL
KRQELESENKKLKNDLNELRKAIADAANEEDSNEEPSSYTLLLNQLKSALEELEVRKEEI
LILRTQIVNSAQQKDPEKNLDKEKNWANSDKEMDQDDAIEAYHGVCETNRKTEDWGYLNE
DGELGLAYQGLKQVARILEAQLQTQSQQHEDEMEAMTSQIESLKEELEKQQHFLFQALQL
SPEAQVEFGIQQEITRLTNENLDLKELLEKSEKNEKKLKKQLKLYQKKMQETEGTSDFVQ
PERKQPELTRQVTVQRIEKDFQGMLEYYKEDEPLLVRNLVLDLKPELTSATVPCLPAYIL
FMCIRHADYINDDQKVHSLLTSTINGIKKVLKKHNDDFRITSFWLSNSSRLLHCLKQYSG
DEGFMTSNSQKQNEHCLRNFDLTEYRQVLSDLSIQIYQQLIKIAEALLQPMIVSAMLETE
SIQGLSGVKPTGYRKRSSSMADGGDNSYSLEAIIRQLNAFNLVMCDHGLDPEIIQQVFKQ
LFYMINAVSLNNLLLRKDICSWSTGMQLRYNISQLEEWLRGKNLHVSGAAQTMEPLIHAA
QLLQLKKKNQEDAEAICTLCTALTTQQIVKILNLYTPVNEFEERVTVSFIRTIQAQLQNR
NDPPQLLLDSKYMFPVLFPFNPSLITMDTIHIPSSLRLDFLNKV
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtatgagctctactcccggtatacccgggtctggattcctgaccaggatgaa
gtctggagagcggccgaaattatcaaggattataaggaaggagataaaaagctgcacctg
aaacttgaagatgaaactgttatagagttccctgtgactgccacctctttacctcattta
cgtaatccagatattctggtgggtgaaaatgacctgacggccctcagctatctccatgag
ccggccgtgcttcacaatctcaaagtgcgcttcttagagtccaaccacatctatacctac
tgtggtattgttttagttgccataaacccctatgagcagttgccaatctacggtgaagat
gtcatttacgcgtacagcggccaaaacatgggtgacatggatccccacatatttgctgtg
gctgaagaagcctacaagcagatggccagggatgagaagaaccagtccatcatagtgagt
ggggaatctggtgccggaaaaaccgtgtctgccaaatatgccatgagatactttgccaca
gttggtgggtctgctagtgaaacaaacgtggaagataaagtgctggcgtccagccccatc
atggaggccatcggcaatgccaaaacaacacggaatgataacagcagtagattcggaaag
tacattcagattggattcgacaaaagatatcacatcattggtgccaatatgaggacatac
ctgctggagaagtcacgtgtggtgtttcaggcagaagaggagaggaactatcacatcttc
taccaactgtgtgcctcctccaggttacccgagtttgccgacttgtcgctaacccaagcc
gaggattttttctacacctcacagggaggcgaaacggccattgatggagtggatgatgct
gatgactttgacaaaacgagacaagcttttacacttctgggtgtaaaagagtctcatcag
atgactatatttaggatcatcgcctctattctgcatctggggaacgtgcagatcctttcc
gagcgtgatggagaatccagcagtctggagaaagaggacgaacatctcaaccacttctgc
accttgctcggcgtggagcacgaccagatggcgcactggctgtgccatcggaaattggtc
accacatcagagacctatgtgaagaacatggccgttcagcaagccgtgaatgccaggaac
gctctggcaaagcacatctatgctcagctatttaactggatcgtacatcatgtgaacaaa
gctttgcataccaccatcaaacagcactcttttattggggtgctcgacatatacgggttt
gaaacatttgaaataaacagctttgaacaattctgcatcaattacgccaatgaaaagcta
cagcagcaatttaactcgcatgtatttaaactggaacaagaggaatacatgaaggaacag
atcccttggaccctaattgatttctatgataatcaaccctgcattgacctgatcgaggca
aaactcggcattctggatcttctggatgaggagtgcaaggtccccaagggaacagaccag
aactgggcccagaaactctacgataggcacggcagtagtcagcactttaagaaaccacgg
atgtcgaatatctccttcatcattgtgcactttgctgataaggtggagtatcagtgtgac
ggcttcttagagaagaatcgagataccgtgtatgaggaacagatcaacattttcaaagcc
agcaagtatcagttggtcgctgaccttttccatgatgaaaaggacgctgtacctccaaca
ccaactggcaaatcaaaaatcaatgttcggcccctcaaacctgcaatgaaaaatgccaat
aaagaacacaagaaaaccgtgggacatcagtttcggaactccctcaagctgctgatggaa
accttgaacgccaccacgcctcattatgtccgctgcattaagcccaacgatgagaaactg
gcattcagcttcgatcccaagcgagccgtacagcagctgagggcgtgtggagtcctggag
acaatcaggatcagcgctgctggctatccatctaggtggacttaccctgatttcttcaac
cggtatcgtgttcttatgagcaagaaagagctttccctgagtgataaaaagctcatctgc
aagaatgttctagagcatctgataaaggatccagataaatcccagtttggtcgcacaaag
atcttcttccgcgccgggcaagtggcttacctggagaagctgcgagcggacaagttccgt
gcggccaccattatgatccagaagacggtgcggggctggttacagaggctgaaatacagg
aggatgaagattgcgtccgtcactattcagagatacgtgcggggacacctcgctcgcaga
ttggttcagcatattcgaaaaacgaaagcagccatttgcttccagaaacaattccgaatg
attcgcatctatcgggtgtaccagacaatgcgcagggcggccatcaccatccagtcctac
gcccggggcatggtggaccggagagcttatcgtgagctcctgcaacagcacaaggttacg
atcattcagaagaacctacgagggtggatggtccgcaaacagtttgtcaagttccgctgt
gccgccattgtcatccagtgttatttccgccgcatgatggcacggcgggagcttaaaaag
ctgaagattgaggccaggacggccgagcactttaagaagctgagcgtgggcatggagaac
aaggtggttcagctgcagaggaagattgatgagcagaacaaagactacaaggacctgaag
gagcagctagtgacagtgacgacctctcgctcaacagaggtggagaagctgcagaaggag
ctggagagacaacggcagaaccagcaggatgataaccaactggccagtctgcaggaggag
atcgaggctctgagggctgaactggaaagcagcagagatgagaggaagattgtagaggac
tcctatatgagcgagaagcagcagctacagcagcgaatctctgaactagaagatgagaac
agccacctaaaggaagagaaagaagagctcaatcaacgaatcctcctccactctgaagat
gaatttacgcaaagcgaaggagtgaaggaaaacctgcagacccagaaggacctggaggag
gagcgggctcgctaccaaaatctggtgaaggagtatacccgtctagagcagagatatgac
aacttgcgggaggaggtcacgcttatcaagcaaacccctgggcaccgtaggaatccctcc
aaccagagcagcttggaatctgactccaactacccctccatctccacgtctgaaattggg
gacactgaagacaccattatggaggttgaggaggtcgggctggagaaggctgcaatggac
atgactctgttcctgaaacttcagaagagggtgagggagctggaactggagaggaagaaa
ctgcaaaaccagttagagaagaaggagaaggagaaggagcaggaagaaaataataagccg
caggtcattgaaacatcaaatgacacggatcgtgacacagacatcgcctacaacaacctg
aagaggcaagagctagaatctgagaataagaagctcaagaatgacctgaatgagcttagg
aaagccattgcggatgcagcaaatgaggaagactctaatgaggagcccagcagttacacc
ctcctactgaaccagctgaaatccgccctcgaggaattggaagtgcgcaaggaagagatt
ctcattctcaggacgcagattgtaaactctgctcagcagaaagacccagagaagaatctg
gataaagagaaaaactgggcaaacagcgataaagaaatggatcaggatgatgccatcgag
gcatatcatggtgtctgtgagaccaacagaaagactgaggactgggggtatctgaatgaa
gatggtgagctgggcctggcctatcaaggtttaaaacaagtggccaggatcctggaggct
cagctacagacccagagccagcagcacgaggatgagatggaggcaatgacttctcagatc
gaatctctgaaggaagaactagagaagcagcagcactttctcttccaggcactgcagctc
tctcctgaggctcaggtggagttcggcatccagcaggaaatcacacgactcaccaatgag
aacctggacctaaaagaattgttggagaagtcagagaagaatgagaagaaactgaagaag
cagctaaagctgtatcagaagaagatgcaggaaacagaagggacttcagactttgtccaa
ccagagcggaagcagccagagctgaccaggcaggtgacggtacagcgcatcgagaaggac
ttccagggcatgctggagtattataaggaggacgagcctctcctcgtcaggaacctcgta
ttagacctgaagcctgagctgacctctgcgaccgtgccgtgtctgcccgcgtacatcttg
tttatgtgcatcagacacgccgactatattaatgacgatcaaaaggtccactcgctgctc
acctccaccatcaatggcatcaagaaagtgcttaagaaacacaacgatgacttccggatt
acatcattctggctctcaaactccagccgtctcctccattgtttgaagcaatatagcggg
gatgagggtttcatgaccagcaattctcagaagcagaacgagcattgtctccgtaatttc
gacctcaccgagtaccgtcaggttcttagtgatctgtccatccagatctatcagcagctc
ataaagatcgcagaggctctcctgcagccaatgatagtgtcggccatgttggaaaccgag
agtattcagggtttgtccggagtgaagccaactggatatcggaaaagatcctccagtatg
gcggatggcggcgacaactcctacagcctggaagccatcatccgccagctgaatgccttc
aatctcgtcatgtgtgatcatggcctagaccccgagattatccagcaagtgttcaaacag
ctcttctacatgatcaacgccgtgtcactgaacaaccttcttctgaggaaagacatctgt
tcctggagcaccggcatgcagctcaggtataacatcagtcagctggaggaatggctgcga
gggaagaacctgcatgtcagcggagcagctcagacgatggagcctctgatccatgcagca
caactactacagctaaagaagaaaaaccaagaggatgctgaggccatctgcacgctgtgt
acggctctcactacacaacagattgtgaaaatcctgaacctgtacacaccagtaaatgaa
tttgaagagcgagtcacagtgtccttcatcaggaccattcaggctcagttacagaaccgg
aatgaccctccacaactcctgctagactccaagtatatgttccccgtcttattccccttc
aacccttcactgatcaccatggacaccatccacatcccatcttcccttcgcctcgacttc
ctcaacaaagtctaa
DBGET
integrated database retrieval system
