Rana temporaria (common frog): 120926814
Help
Entry
120926814 CDS
T07929
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
rtem03083
Polycomb repressive complex
rtem04110
Cell cycle
rtem04330
Notch signaling pathway
rtem04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120926814 (HDAC1)
03083 Polycomb repressive complex
120926814 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120926814 (HDAC1)
04350 TGF-beta signaling pathway
120926814 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120926814 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120926814 (HDAC1)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120926814 (HDAC1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120926814 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
120926814 (HDAC1)
BRAF-HDAC complex
120926814 (HDAC1)
REST complex
120926814 (HDAC1)
SHIP complex
120926814 (HDAC1)
MiDAC complex
120926814 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120926814 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120926814 (HDAC1)
Chromatin remodeling factors
NuRD complex
120926814 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120926814
NCBI-ProteinID:
XP_040192974
LinkDB
All DBs
Position
2:complement(273624514..273659322)
Genome browser
AA seq
479 aa
AA seq
DB search
MAYTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
SVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFMKTFNLPLLMLGG
GGYTIRNVARCWTFETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDSVHDDSGDEDDDDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRNLANFKKVKRAKTEEEKDGEEKKDLEDDKLKEEKTEVKRVKEETKTA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacacacaaggaacaaagaagaaagtgtgctattactatgatggtgatgttggt
aattattattatgggcaggggcatccaatgaaacctcacaggataagaatgacccacaat
ctacttcttaattatggattgtacaggaagatggaaatctatagaccacacaaagccagt
gctgaagaaatgacaaaatatcacagtgatgattacattaaatttctgcgttccatccgg
ccagataacatgtctgaatacagcaaacagatgcaaagatttaatgtcggagaagactgt
cctgtgtttgatggtctctttgagttctgccagttgtcaacaggtggatctgttgcaagc
tctgttaaactaaacaagcagcaaacggacattgccgtaaactgggcaggtggacttcat
catgccaagaaatctgaggcatctggcttttgctatgtcaatgacatcgtgcttgccatt
ctggaacttcttaagtatcatcagagagtactgtacattgatattgatattcatcatggt
gatggtgtggaagaagctttttacaccacagacagagtcatgactgtttcttttcataaa
tatggagaatattttccagggactggggatctgagggatatcggggctggaaaaggtaaa
tactatgcagtaaactacccattgcgagatggcattgatgatgaatcctatgaagccata
tttaaaccggtcatgactaaggttatggaaatgtaccagcctagtgctgttgtcctgcag
tgtggtgcagattcactttctggggacagacttgggtgctttaatctaactatcaaagga
catgctaagtgtgtggagtttatgaagaccttcaatctaccattgctgatgctgggtgga
ggtggctacaccattagaaatgttgcccgatgttggacattcgagacagctgtggctcta
gacacagaaattcccaatgagcttccatacaatgactactttgaatattttggccctgac
ttcaaacttcacatcagcccttctaacatgacaaaccagaatacaaatgagtacctggaa
aaaatcaagcagcgactgtttgagaatctacggatgcttccccatgcgcctggtgtacag
atgcaggcaatccctgaggattctgtgcatgatgatagtggtgatgaagatgatgatgat
cctgacaaacgtatttccattcgatcttcagataagagaattgcatgtgatgaggaattt
tcagattcggaggatgagggagagggaggacgtaggaatcttgccaatttcaagaaagta
aagcgtgccaaaacagaggaggaaaaagatggcgaggagaagaaagatctcgaggatgac
aagctaaaagaagaaaaaacagaagttaaacgggtaaaagaagagaccaaaactgcctga
DBGET
integrated database retrieval system
