Rana temporaria (common frog): 120926940
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Entry
120926940 CDS
T07929
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120926940
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120926940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120926940
Spliceosome [BR:
rtem03041
]
Common components
Common spliceosomal components
SR proteins
120926940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120926940
NCBI-ProteinID:
XP_040193206
LinkDB
All DBs
Position
2:complement(298649728..298665937)
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AA seq
463 aa
AA seq
DB search
MSRLSTLPRVYVGRLSHRARERDVERFFKGFGKIVEVDLKNGYGFVEFEDMRDAEDAVYE
MNGRDLCGERVIVEHARAPRREARSGYGYRKSSNEKFGPPVRTIYRLRVENLSTRCSWQD
LKDFMRQAGEVTYADAHQRRPNEGIIEFRTYSDMKRALDKLDGSQVNGRRIRLVEDRAGS
RYSSSRSRSRSRSRRSSPSRSRSRSRSRSRRHSRRSRSYSKDSRDSRSKEKNGSKQRDHS
SSKERSPDRAHSERERSLSRERRDSDGSVRKDRDRSGSRHRRVRSRSTSTDRKENSRRSK
ERRERDRSHSRERSSSKNRDSRTRRESCSSERSHSNESRKNGRRSSRSISKERSRKRSRE
RSVSEERSKKSRREDTVAFTTESDQEHEIEEHEIEEGEIDYPRSATANVPAPSSPPLSPP
SSPPPSPLPAEPVATLEIEEEEASAAVNSPSEQQSMSPSTTEA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcctatcgaccttaccgcgggtctatgtcgggcgcctgagccatcgggcccgg
gagagggacgtggagcgtttcttcaagggctttgggaagatcgtagaggtggatctgaag
aacgggtatggctttgtggagtttgaagacatgcgtgatgctgaagatgcagtttatgag
atgaatggaagggacctatgtggtgaacgggtcattgtagaacatgcacgtgctccaagg
agagaagctcgcagtggttatggataccgcaaaagtagcaatgagaagtttgggcctcca
gttcgaacaatctaccggctgagggtagagaacctttccacccgatgtagttggcaggac
cttaaggatttcatgcgccaggctggagaagttacttatgcggatgcacatcagcgtcgt
cctaatgaaggaataattgagttccgtacatattcggacatgaagcgggcgctagataaa
ctggatggttcgcaagttaatgggaggagaatacgtttggtggaagatagggctggatcc
agatactcttcttcacgcagtcggtccaggtcccgttcacgtaggagtagtccttctaga
tcaaggtctcgttcgcgcagcaggagcagaaggcacagtcggagaagcaggagttacagc
aaagacagcagagatagcaggagtaaagagaaaaatggaagtaagcagagggatcacagc
agcagtaaagagagaagtccagaccgggcgcatagtgagagagaaagaagcctgagcagg
gaaagacgtgatagtgatggaagtgtgagaaaggatagggacagaagtggcagcagacac
aggagagtaaggagcagaagcacgagcacggacaggaaagagaatagcagacgaagcaag
gaaagaagagaaagggacagaagtcatagcagagagaggagtagtagcaaaaaccgagat
agccgaacaaggagggaatcttgtagctcagaaaggagccatagcaatgaaagtagaaag
aatggtaggcgttcaagtcgtagtattagcaaagagagatctcggaaacgtagcagggag
agaagtgtcagtgaggagcgctccaagaaaagcaggagagaggacacagtggcgtttact
acagaatctgaccaggaacatgaaattgaggaacatgaaattgaggaaggtgagattgac
taccctagatctgcaacagccaatgttcctgcaccatcgtctcctccattgtctcctcca
tcgtctcccccaccctctcccctgcctgctgaacctgttgccacactggaaattgaagag
gaagaggcatcagcagcagtcaattctccttctgaacagcaatctatgtcgccctccacc
acagaagcttga
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