Rana temporaria (common frog): 120927078
Help
Entry
120927078 CDS
T07929
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120927078 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120927078 (IRF6)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120927078 (IRF6)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120927078 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120927078
NCBI-ProteinID:
XP_040193438
LinkDB
All DBs
Position
2:333814665..333841308
Genome browser
AA seq
469 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGMYPGLVWLDRDAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGADDPDPAKWKAQLRCALNKSREFKLMYDGTKEVPMNPVKIYEVCDIPQSQ
GPILNPGSTGSSPWDDEEYEEDDISQSQMHVSIQEPFNGLKINDSPMAPASLESCTPEPD
WPKSEPQDMEVPQTPSGVDLFGSPELWISSLPMTDLEIQFLYRGKEMGQTMTVSNPQGCR
LFYGDLGPMPNQEELFGPTSLEQVRFPGPEQILNERQKLYTSRLLDVMDRGLILEVSGHA
IYAVRLCQCKVYWSGPCSPSPNTPNLIERQKKVKLFCLETFLSELICHQKGSGAKQPPYE
IYLCFGEEWPDGKPKERKLIIVQIIPVVARMILEMFSGDVTRSFESGSVRLQISVPDIKD
NIVAHLKQLYRLLQNHQGADPWPMLPHQNMQQSNLHPSSLHIAQALQAQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcacccacgccgtgttcggctaaagccatggttggtggctcaggtggacagc
ggaatgtatccaggtctggtatggctagacagggatgcaaagagatttcaaataccatgg
aaacatgcaacacgtcatagccctcagcatgaagaggagaacaccattttcaaggcatgg
gctgtagagactggtaaatatcaagaaggagctgatgatcctgatccagcaaagtggaag
gcccagttgcgctgcgcgcttaacaaaagtcgagaatttaaactaatgtatgatggaacc
aaagaagttcctatgaaccccgttaaaatctatgaggtctgtgacatacctcaatcccaa
ggcccaatcctaaacccaggttctactggttcttcaccatgggatgacgaggagtatgaa
gaggatgatataagtcagtcacagatgcatgtctcaattcaggagccctttaatggatta
aaaatcaatgattcccccatggccccagcaagcttagagagctgtactcctgaaccagac
tggccaaagtcggaaccgcaagacatggaggttccccagaccccgtcaggggtggatctt
tttgggtctccagaattgtggattagctccctacctatgactgatcttgagatccagttc
ctctaccggggtaaagaaatgggtcagacaatgactgttagtaaccctcaaggctgccgg
cttttttatggtgacctaggtccaatgccaaaccaagaagaactttttggtcccaccagt
ctggagcaagtgagatttccaggcccagagcagattttaaatgagaggcagaagttgtac
actagccgtctgctagatgtcatggacagaggacttatcttggaagttagtgggcatgcc
atctatgctgttcgactttgccagtgcaaggtttactggtcaggaccatgttctccttca
ccaaatactccgaatctgattgagcgccagaagaaagtgaaacttttctgtttggagacc
ttcttaagtgaactaatttgtcatcaaaaaggaagtggagctaagcagcctccatatgaa
atttacctgtgttttggagaagagtggcctgatggtaaaccaaaggagaggaagctgatt
attgtgcaaatcattccagtggtcgctcggatgattcttgagatgttctctggagatgtc
actcgatcctttgaaagtggaagtgtccgcttacaaatttctgttcctgatattaaggat
aacattgttgcccacctcaaacagctttaccgcctcctacagaatcaccagggtgcagac
ccatggccaatgttaccacatcagaacatgcagcagtcaaatctgcacccttcaagccta
catatcgctcaggcactgcaagctcaatga
DBGET
integrated database retrieval system
