Rana temporaria (common frog): 120927120
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Entry
120927120 CDS
T07929
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120927120 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120927120 (NFASC)
Cell adhesion molecules [BR:
rtem04515
]
Immunoglobulin superfamily
L1 family
120927120 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_4
Ig_6
V-set_CD47
Pur_ac_phosph_N
CBM49
DUF4998
Motif
Other DBs
NCBI-GeneID:
120927120
NCBI-ProteinID:
XP_040193497
LinkDB
All DBs
Position
2:complement(345865108..346076134)
Genome browser
AA seq
1351 aa
AA seq
DB search
MKSEPASWTPYIVLLLHLAYAIEVPLDPIIQRELIQPPTITKQSVKNYIVDPRDNIIIEC
EAQGNPHPTFTWTRNGKFYNVAKDPKVSFRRRAGTLVIDIYGGGRPEDYEGEYQCFARNQ
HGTALSNKILLQVSRSPLWPKENLDPVVVNEGTSLILQCNPPPGLPPPVIFWMSSSMEPI
VQNRRVSQGLNGDLYFSNVLREDAVTDYSCNARSHFTHTIQQKNAYTLKVLTKNSRNDSA
VHSVNHTIMYHARGVPERIPTFLLPMGTSSTKLVLRDEDLLLECIASGVPTPEIMWYKKG
GELPSQKLKFENYNKTLRISPVSEEDSGEYFCQASNRMGSIRHTISVRVKAAPYWLDEPK
NLILAPGENGRLVCRASGNPKPIIQWLMNGEAISTPNPNFEVAGDTVIFREVQTGNSAVF
QCNASNAHGYLLANAFVSILDVPSRMLGPRNQFIKVIEYNRTQLDCPFFGSPIPTLRWFK
NGQGSNLDGGNYRVHENGTLEISTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVK
GPEDQIARRGSTVRLDCRVRWDNTLRLTVMWMKDDTQLYIGSRMKKEDDGLTIFGVAEKD
QGAYTCVAKTELDQDFAKAYLTILETSSSPTSHLTTILRDKPDSPMDLELTDLAERSVRL
TWTPGDDNNSPITGFIVQFEEDRYQAGKWHNLASVPGNVNSALLRLSPYVNYQFRVLAIN
DLGSSMPSPTSERYQTNGAPPEVNPSDVRGAGTRKDNMEITWTPLNSTQAYGPNLRYNVK
WRQRQSGEAWNNVTVWNNRHVVWNTPVYTPYEIRVQAENEYGRAPDPNTVIGYSGEDYPK
AAPSDIKLRVTNSTAISLQWSRVTPASIQGSLVEYRAYYWRESSLLRGHWVSRKKLQQSF
IGDRVRGIVSFLIPYSNYKLYMVAVNGRGDGPKSDIKEFTTPEGAPSQPKNFRFSEPNRE
FIILEWSSPEHPNGNLTGYNIRYQAFNGTRFARPVVETLSPNQTKYTLTRTDPISRYRIT
LSARTQVGAGEVVTVDTPLKPDEVPPTSVAPTSPVSPTEAPTEIPTVPLTTPGTTTTVTT
TTSTTTLSTTTFITATEIRQTTVASIHEIATSGQPIWNITALPNSHWANITWMHNLGPGS
EFMVEYIDSNNMNRTVPVKGHPPSIQLSDLVPGMTYRVRVYSREHHSVTSPYVMFETSSA
YTKNQVDIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVREKKEVALGPEDQKDE
DGSFDYRKEHRFFGSDEDNKPLQGSQTSIDGTIKQQESDDSLVDYGEGGEGQFNEDGSFI
GQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgaacctgcctcatggacaccctatattgttttacttttgcatcttgcttat
gctattgaagttcctttggacccaatcattcaacgagagcttattcagccgccaaccatt
actaagcaatctgtgaaaaattatattgttgatccacgcgataacatcatcattgaatgt
gaagctcagggaaatccacatccgacttttacatggaccaggaatggaaaattttacaat
gttgctaaggatccaaaagtttcatttcggagacgtgcaggaacccttgtcatagacatt
tatgggggtggtagaccagaagattatgaaggggaatatcagtgctttgctcgcaaccag
catgggacagctctttcaaataaaatcttacttcaggtttctagatctccactatggcca
aaagaaaacttagatccggttgttgtcaatgaagggacatctctcattctgcaatgcaac
cctcctcctggtctccctcctccagtcatattctggatgagcagctcaatggaaccaatt
gtgcagaacagaagagtgtcccagggtctgaacggagacctgtacttctctaacgtcttg
cgtgaggatgctgtgacagattatagctgcaatgctcgctcccatttcacacataccata
cagcagaaaaatgcatacactttaaaagtgctgaccaagaattcccgtaatgactctgca
gtacattccgtgaaccatactattatgtatcatgctcgaggggttccagagcggatacca
acattcttactgcctatggggacatcaagcaccaaactggttctgcgtgatgaagatcta
cttctggagtgcattgcatctggagtacccaccccagaaataatgtggtataagaaagga
ggagagctgcccagtcagaaactgaagtttgagaattacaacaagaccctgcgtatttcc
cctgtctctgaggaagacagtggagagtatttctgccaggcatcaaacaggatgggaagt
atcagacacaccatttctgttcgtgttaaggcggctccttattggctggatgaaccaaaa
aacttgatcttagccccaggagaaaatggccgcttggtctgtcgagccagcggcaacccc
aaacccatcattcagtggttgatgaatggagaagcaatctcaactccaaacccaaatttt
gaagttgctggtgacactgtcattttccgagaagtgcagaccggtaacagtgcagttttt
cagtgtaatgcttctaatgcccatggatatctgttggctaatgcttttgtctccatactt
gatgtcccatcgcgaatgctgggccctcggaaccagttcattaaagtaattgaatataat
aggactcagttagactgccccttttttggatctcccatacctactcttcgctggtttaag
aacggacagggcagtaacctggatggaggaaattacagagtgcatgaaaatggtacactg
gagattagtaccgtgcgaaaggaggatcaaggcaaatacacttgtgttgctacaaacatc
cttggcaatgctgaaaacaccgtaaggctggaagtcaaagagccaacccgtattgtgaag
ggtccagaagatcagattgctagacgtggctccactgttcgattggactgtcgtgttagg
tgggataatacactgagactaacagtcatgtggatgaaggatgatactcagctgtacata
ggcagcagaatgaagaaggaagatgatggcctgactatatttggagtagcagagaaggat
cagggagcatacacctgtgtggctaaaacagaactggatcaggactttgcaaaagcatat
ctcactatactagaaacatcttcctcacctactagtcacctgactacaatactaagagac
aaaccagactcacccatggatttggagctgacagatcttgccgaaagaagtgttcgtctt
acgtggaccccaggtgatgataacaacagtcctataacaggtttcattgtacagtttgaa
gaggatcgctatcaggcaggcaaatggcataaccttgcctctgttcctggtaatgtaaac
tctgctttgcttcgtctctcaccgtatgtcaactaccaatttcgggtactggcaataaat
gatcttggaagcagcatgcccagcccaacttctgaaagatatcagaccaatggggcaccc
ccagaagttaacccaagtgatgtccgtggagcaggcactcggaaagacaacatggagata
acatggacaccactgaactcaacacaggcatatgggccaaacttgcgatacaatgtgaaa
tggcgacagcgtcaatcaggagaagcctggaataatgtcactgtttggaataacaggcat
gttgtctggaacaccccagtgtacacaccttatgagataagagtacaggcagaaaatgag
tatggcagagctccagatccgaacactgtcattggatactcaggagaagactatcctaag
gctgcaccctctgacattaaattaagggtcacgaacagcactgccatctcccttcagtgg
agtcgtgtgacccctgcttctatccaaggaagccttgtggaatacagagcctattactgg
agggagagtagtttgctgaggggacactgggtctctcgaaagaagttacagcagagtttt
atcggagatcgcgtgcgggggattgtgtcattcctgataccttacagcaactacaaatta
tacatggtagcagtgaatgggcgaggggatggcccgaagagtgatattaaagagtttact
acacccgagggcgcacctagtcaacctaagaactttagattcagtgagccaaatcgggaa
ttcattattttggaatggagctctccagagcacccaaatggaaatctaactggatataat
atacgctaccaagcatttaatggaaccagatttgcaagaccagtggtagagacgctgtct
ccaaatcagacaaaatacaccttgacaagaacagatcctatctcacgctatcgaatcacg
ctgagtgccaggactcaggttggagctggagaagttgtcactgttgatacacctctcaaa
ccagatgaagttccccccacgtcagttgcccctacgtctccagtatctcccacagaggca
cctacagaaattccaactgttcccctgaccactcctggtactaccaccactgttactact
acgactagcacaaccacactctctacaactaccttcattactgctactgaaatcaggcaa
acaacagtggctagcatccacgaaatagcgacatcaggacaacctatttggaacatcaca
gctttgcccaacagccactgggcaaacatcacctggatgcataacttagggcctggctct
gagtttatggttgagtatattgatagtaataacatgaacagaactgttcccgttaagggt
catcccccctcaattcagctgtctgacctggtccccgggatgacctaccgagtacgggtt
tattcccgggagcaccactcagtcacaagcccatacgtgatgttcgagaccagctcagct
tacacaaaaaaccaagtagacattgccactcaaggctggttcattgggctcatgtgtgct
gttgctctgcttgtacttatcctgttgattgtgtgcttcattaagaggagtcgaggaggc
aaatatccagtgcgagagaaaaaggaagttgctttgggtcctgaagatcaaaaggatgaa
gatggatcatttgattacaggaaagagcacaggttttttggaagtgacgaagacaacaag
ccactgcaaggcagccagacgtcaatagatggaaccataaagcagcaggaaagtgacgac
agccttgttgattatggtgaaggaggagaaggacagtttaatgaagatggctcatttata
gggcagtatacagttaaaaaggacaaagatgagacagaaggaaatgaaagttcagaagcc
acttcaccagttaatgccatctattctttggcatag
DBGET
integrated database retrieval system
