Rana temporaria (common frog): 120927327
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Entry
120927327 CDS
T07929
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120927327 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
120927327 (PDZD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120927327
NCBI-ProteinID:
XP_040193855
LinkDB
All DBs
Position
1:complement(52433994..52850588)
Genome browser
AA seq
2491 aa
AA seq
DB search
MPITQENAVLHLSLLRQWLQDNPRVDTGEPDAALYLSAVQKLKEYIQLNFSLEEMEPSCH
QVVLDMEICTVYLTRNGDDDLILGLNFGNIPIFGHCGEKRRGGKKRKVQNGPVLDVGCIW
ITDLKKQSPAAKSGKIKLRDEVLSMNGQLMVGVDVSGASYLAEQCWNGGFIYLIMLRRIK
RKAPLPPSNGGRSSSCEPKATSSTSQPSTRAAQSGKRTRKFGVISRTVGKDSKENKGEKG
SAHESRQCSPMEVDGGHTSDEASGEDGRLGQDSHSSYDEERCEYHVSKAARTAAKSVDSS
VQCDGCCIWKMHMQKGADGLGIQITGGRGSKRSPHGIVVAHVEEGGSADRDGRLKAGDEL
LMINGQSLVGLSHQEAVGILRATSGLVQLVVASRDGTEVDFCKYPSTSLPDLVSACSAQD
NHTDNKENVEPDGKEEKGGTSQSESLAVTKTDNFQEKISTDESKNACRSPTLGNSLLKYR
SRSQGSGSRLESVGEDDELAVANGEAYIERGDKMPHGGRKHSLPQQLDSSARQEYAIVKK
TARSLSTVQVESPWRLAQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFSN
GAAAADGRLKEGDELLEVNGESLQGLTHQEAIHTFKQLRKGVVTLTVRTRLRSPSLTPCP
TPTLLSRSSSPNSSMSFGPSFHGSEDGDSSPRKGPGPKDRVVMEVSLNKEPGVGLGIGVC
CLALENNSPAIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSECGPG
PVSLIISRHPNPKMSEQEMDEVISRTTHRESKDSSHSPGLHLKSPSPNVKPKQIDASAPL
SWTMKRFLEPASRGSVSSEVELSQYFSQDTPSQSSLSDTAVTGSSDEEQLRLRSASSSME
ENTVPFNAAKNGATKGQHSCFSQRNSAGHSSEKHVAFRQSSIDESPQSIRSPLQRQRRIV
CYDDDDASEEDDFVKKEESHFCDTKKKNGDEDSGIVMTTPSLDVDEEVPPDELPRSILGE
AGTSLCSSSVESEDSSVEHIVDSPFIAIKSFEYTTRPENHPSTLGIKDPQEGQTESKRSP
KLEHKAVTRVKSMLSNENPNASKHKNEDNRSSAKALKTTPVVKKSEGVEILGRCNTETVE
LLCSEYESVGLDLEIKQSPVKVIITGIRPQGETGKESMGKLAPGDEILSINGIQVRDMSY
QETCNYVQSLPSAVTLEVQKPVSAVDRLSRIIMTSGSDTTREDHLEETSMEKDHCNTSLH
KCCSTDNDLPSSTSPVLDKKGVPILCSSPGHCGGSPVTNIDDFISELDQTCNVEVKSFSE
QTVYAKSDSPANKLSSNNTTFTYQAVDTAGPLGFSILDTIPIDNTVAINKNSLSSYCRNF
SNFTTEDFSLSEQFESSSFELSNSMYGTVEDSDSESLLEIPSDSTSDMISSLQNQSFVSE
TQATTDSEEEPIEICCASKKDDVEMHKAPHAYQSEPVICEPRQLNSGYCLGPKCGETSGN
MTPFDASHKKYAQEPLEKVDLNVEDYLKEGPPMLTCDPTEVRPSLCVDIYNMDINATSQV
NAEDQADILSSQTNCGKGLLFNVNSDVRTRICSKEPHGAIQSPVRTKSHQTSTSDEKNGL
SKTETKTVKSSTTKTSVVERSKVNGIGSKLQDGKRVLNSNPDVLSTQMPKPGPKLKGLSI
KSKNRPNADVAKSFINKTESWDYRKSTTQLSPKLLPKRPTTMDGPPSPKDLSNRRAANKS
ILPQAKVDPISVVSSKSSLGSNKKLPTNGTTKSPEESNQEIESSVDMDESFDTGDKVACH
QTTTDNDKCFSTKSDIDGKQKGDLSRGSISNTVPKNETHSLALLHNHEEQMDNNDVRRTF
MEVKLSPSLSSINTHLRNESRSKTDYTIYDSFAIVYKSPKLKEDVPLVEKPPSGSKTVTR
TYSMPTHLQNAANNDVHHRKVISLEDPISLPVSYQSIYDYSSEDLSKTNDDSLLVNERVS
VRNDVPRSVKRNYYYEFNWPHETLSSLTVKQRIKSFENLVNFDKSVMKIIEINNTPFSCK
PPLTRRSSGSIPLHTQSIEDAKVLRRSLSSCCDNQSEVSLATDMAKSSSSMALTYTEKLP
VDSVKDISDHESTRTEKEENSVHGVQVRKSRMTPSHIRPSLSRSKLRELRALSMPDLDKL
CTEDFSIESKAPQYKTELEITPRRIPGADNVSSLNGTRLSSKDNGVSGLAYDGDGSQDGE
LVRKSWSVSLDQLSVSTRDQQKLQAVLTSVASKSDIITLIQEAKAQVERKEDVYFVVLNK
EEGAGLGFSIAGGVDLELKPVTVHRVFSKAASPQDVAVERGDRILSINGCSMHGVPHGDA
LSALHKAKLHREAVIVIRKESDREKASRTDSSITTGGRHSTSGRDVSMATGPAHLDLRDA
VCVELHKTSAGLGFSLDGGKASIYGDRPLFIKRIFKGGAAEQARRIEVGDEIISIGGKTL
IGLMHYDAWNIIKSVPEGPVQLLIRKHRTAV
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcaggagaatgccgtgcttcacctgtctcttctacgccaatggcttcag
gacaacccacgggtggacaccggcgaacccgacgcggccttgtatctatctgctgttcag
aaactcaaggagtacatccagctaaatttctctttggaagaaatggaaccgagctgccac
caggttgtcctagacatggaaatctgcacagtgtacctcaccaggaatggcgacgatgac
ctgattctaggtctgaattttggaaatattcccatttttgggcattgtggtgaaaaacgc
cgcgggggtaaaaagaggaaggtacaaaatgggcctgtgcttgatgttggatgtatatgg
ataacggatttgaagaagcagagtccagcggctaagtccggcaagataaaactgcgagat
gaggtcctgtcgatgaatggacaactgatggttggcgtagatgtttctggtgccagttac
ctggctgagcagtgctggaatggcggattcatctacctgatcatgttgcgccgcatcaaa
cgcaaagctcctcttccaccttccaatggcggccgcagcagctcttgtgaacccaaagca
accagttctacctcacagcccagcaccagggcggcacagagcgggaagaggactcggaag
tttggcgtcatctccaggacggtgggcaaagacagcaaggagaataagggggagaagggc
tctgctcatgagagccgccagtgctcgcccatggaggtggacggagggcacactagtgat
gaggcttctggagaggacggtcgcttgggacaagattcacacagcagttatgatgaggag
aggtgcgaatatcatgtgtcaaaggctgcaaggactgcggctaaatcggtggactcctcc
gtgcagtgtgacggatgctgtatctggaagatgcatatgcaaaagggagcagatgggctc
gggattcagattactggaggccgaggttcgaaaaggtctcctcatggaattgttgttgcc
cacgtggaagaaggaggctcagcagacagggatggtaggctaaaagctggtgatgagctt
ctcatgatcaatggccagtcactagttgggctttctcatcaagaagctgttggcatactg
cgggctacaagtggactggtacagttggtggtggccagcagggatggaacagaggtggat
ttctgcaaatacccgtccacgagcctgccggacctcgtcagtgcgtgctctgcccaggac
aatcacacagacaataaggagaatgtggaacccgatggaaaagaggaaaagggaggaacc
agtcaatccgagtcgctggctgtgacaaaaacggacaactttcaagagaaaatttcgaca
gatgagtccaaaaatgcttgtcggagtccaacattgggcaacagtcttctaaagtacagg
agccgatcacaaggaagtggcagccggctggaatcagtgggtgaggacgatgagctggcc
gtggccaatggagaggcgtatattgagcgaggtgacaaaatgccacatggtggacggaaa
cactcacttccacaacagctggattcctcagctcggcaggaatacgccattgtaaagaaa
acagccagatctttaagcacagtgcaggtggaatcaccttggaggctcgctcagccctca
atcatctcaaatattgtcttgatgaaaggccaaggaaagggacttgggtttagcatcgtt
ggaggtcaggattctgccagagggagaatgggaatcttcgtgaagacaattttctcaaat
ggagcagcagcggccgatgggaggctaaaagaaggagatgaacttctggaagtcaatgga
gaatcgttacagggactgacccaccaggaggccattcatacatttaagcaactcaggaaa
ggagtggtgactttaaccgtacggacgcgactgcgcagtccaagcctcacaccgtgtcct
actccgactttactcagccgctccagctccccaaactccagcatgagctttgggccatcc
ttccatggctcggaggatggcgattcctctccccgcaaaggaccaggacctaaggacaga
gtcgtaatggaagtctctcttaacaaagaacctggtgttggtcttggcattggagtatgc
tgccttgctctagaaaacaactctcccgccatttacatccacagcttagctccaggatct
gtcgccaagatggatggaagactaagccgtggtgatcagatcctggaagctgactccgtg
agtctccgccatgccgcattaagcgaggcgtacgccattttaagcgagtgtggaccagga
cctgtgagcttaataatcagccgacatccaaacccaaagatgtcagagcaagaaatggat
gaggttatctctcgtactacccatcgtgagagcaaggactcttcccacagtcccggtctg
catttaaaaagcccatctccaaatgtgaaaccgaaacaaatagatgcatcggcaccactt
agctggactatgaaacgtttcctggaacctgcaagccgaggttcggtgagttcagaagta
gagctgtcgcaatacttctcccaggatacccccagccagtcttccctttctgacaccgcc
gtgactggctcaagtgacgaggagcagctgcgtttgagaagcgccagtagctctatggag
gaaaacactgttcctttcaatgctgccaaaaacggggctacaaaaggacagcattcttgt
ttctctcaaagaaatagcgctggtcatagttctgaaaaacacgtagcctttcggcagtcc
agtattgatgaaagtccacagtccataagaagccctcttcagcggcagagaaggatcgtc
tgctatgatgatgacgatgccagtgaagaggatgattttgtcaaaaaagaggagagccat
ttctgcgatactaaaaagaagaacggtgatgaggattctggcattgttatgacaactcct
tccctagatgtcgatgaagaagtcccgcccgatgaactgccaagaagtattcttggggaa
gccgggacttctttgtgcagtagctctgtggaatctgaagacagctcggtggaacatata
gtggactcaccatttattgccattaaatcttttgaatatactacaaggcctgaaaatcat
ccaagtactttgggaataaaagatccccaagaagggcaaactgaaagcaagaggtctccc
aagctagaacacaaagctgtaacccgagtcaagagcatgctgagtaatgaaaatcctaat
gcttccaagcataaaaacgaggacaacaggtcttctgcaaaggctttgaaaaccactccg
gtcgtgaagaaatctgaaggagtggaaattttgggacgatgtaacactgagactgttgag
ctgctctgcagtgaatatgagtcggttgggttagatttggagattaaacaatctcctgtc
aaagttataattactggcataagaccacaaggagaaacgggcaaggaatctatgggaaag
ttggctcctggagatgagatcctctcaataaatggtatccaagtcagagacatgtcttac
caggaaacctgtaattacgtccaatctttaccctcagctgtaactttggaggtccaaaaa
cctgtgtcagctgttgatcgcttgtcccgcattatcatgacatcagggtcagatacaaca
agggaagaccatcttgaggaaacatcaatggagaaagaccattgcaatacttcccttcac
aagtgttgctctactgataatgatttgccttcatcaacttctcctgtactggacaaaaaa
ggagtacccatcctttgttcttcacctggtcattgtggtggtagccctgtaactaacatt
gatgattttataagtgagctagaccagacatgtaatgtggaggttaagagtttttcggaa
caaacagtatatgctaaatctgactcgcctgctaataaattgtcaagcaacaacacaacc
tttacctaccaagctgtcgatactgctggtccactagggttttccattttggacactatt
cctatagacaatacagttgccataaataagaacagcttgagtagttactgtagaaatttt
agcaacttcacaacagaggacttctcgctgtctgaacagtttgaaagtagttcctttgaa
ctctcaaactcaatgtatggaacagtggaagactctgacagtgagtctttactggaaatc
ccatcagattctacaagtgatatgatttcatcccttcagaaccagtcttttgtatctgaa
acacaggcaaccacagattcagaggaagagccaatagaaatatgttgtgctagcaaaaag
gatgatgttgaaatgcataaggctccacatgcttaccaatctgagccagtcatttgtgaa
cccaggcagctgaactctggttactgtctaggtccaaaatgtggagaaacttctggaaac
atgaccccttttgatgcttcacataagaaatatgctcaggaacctcttgaaaaagttgat
ttaaatgtggaagactatttaaaagaaggtccaccaatgcttacatgtgatcctacagaa
gtcagaccatctctctgtgttgatatttataacatggacattaacgccacaagtcaggta
aatgctgaagatcaagcagatattctatctagtcaaaccaattgtggtaaaggattattg
tttaatgtgaattctgatgtaaggactagaatctgttccaaggaaccacatggtgccata
cagtctccagtaagaactaaaagtcaccaaacctcaacatcagatgagaaaaatggactt
tcaaaaacagaaaccaaaactgtaaaaagttccacaacaaaaacctctgttgtggaaaga
tccaaggtaaatggaattggctcaaagctacaagatggtaagagggtgttgaacagtaac
ccagacgttctcagtactcagatgcctaagccagggccaaagttaaaggggctttctata
aagagtaaaaataggcccaatgctgatgttgctaaatcatttattaataaaacggaaagc
tgggactatagaaaatccactacacagctttctcctaaacttctacccaagagacccacc
acaatggatgggccaccttctcccaaagatttgagcaacagaagagctgcaaataaatct
atactgccccaagctaaggtcgatcccatttcagtggttagttccaagtcaagccttggt
agcaataagaaattgccaaccaatggaacaacaaaaagtccagaagaaagcaatcaagag
atcgaatcatctgtagatatggatgaaagctttgacactggagacaaagttgcatgccat
cagacgaccacagacaatgacaagtgctttagcaccaaaagtgatattgatggcaaacaa
aaaggagacttaagcagaggttctataagcaacaccgtgcctaaaaatgaaacccacagt
ttggctttgctccataatcatgaagagcaaatggacaataatgatgttagacgtacattc
atggaagtaaaattgtctccttctctttcgtctataaacacacacttaagaaatgaaagc
agaagtaaaacagactataccatatatgacagctttgctattgtttacaaatccccaaag
ctcaaagaagatgtcccccttgtagagaagccacctagtggatctaagacggtgacgagg
acttattcgatgccaactcatcttcaaaatgctgcaaacaatgatgtccatcatagaaaa
gttatttctttggaagatccaatcagtttgccagtatcatatcaaagcatatatgactac
agtagtgaagatctttccaaaacaaatgacgatagtctacttgttaatgaaagggtctct
gtaaggaatgatgtaccaaggtctgttaaaaggaattattattatgaattcaactggcct
catgaaactttatcttctctgactgtaaagcagaggattaagtcatttgagaatctagta
aactttgacaaaagtgtcatgaagatcattgaaataaataacactcctttttcttgtaaa
cctccattaactcggagatcttcaggttcaatacccttgcatacgcagtccattgaggat
gcaaaggtgttaaggcgcagcttgagctcctgttgtgataaccaaagtgaagtgtcctta
gcaacagacatggcaaaatcttcctcgagtatggccttaacatacactgaaaagctccca
gtagactctgtaaaggatatttcagaccatgagtcgactaggactgagaaagaagagaat
tctgtacatggggtccaggtcagaaaaagcaggatgacgccaagccacataaggccatct
ttatcccgttccaaattacgagaattgagagccctaagcatgccggatcttgataaactt
tgcactgaggatttctctatagagtctaaagcaccacagtataaaaccgaactggagatt
acacccagaaggattccaggagccgacaatgtatcttctctaaatggcactcgtttgagc
tctaaagacaatggtgtatctgggttagcatatgatggagatgggtcacaagatggagaa
cttgtcagaaagtcatggtcagtaagcttggaccaacttagcgtctccaccagggaccag
caaaagctgcaggctgttttgacttctgtggcatccaaatcagatatcattacactgatt
caggaagcaaaagcacaagtggagcggaaagaagatgtgtattttgtagtactgaataaa
gaagagggagccggtctgggcttcagcattgccggaggagtggacctggaactgaaaccc
gtcactgtgcacagagttttctcaaaagcggcctcgccacaagacgtcgcggtggagaga
ggggaccgcatactgtccatcaacggctgctctatgcacggggtgccccacggcgacgct
ctgagcgctctgcacaaagccaagctacacagagaagccgtcatcgtcatccgaaaggaa
agcgacagggagaaggcaagccggacagattcttccattacgacgggaggaagacactcc
acatctggaagagatgtctccatggctacaggaccagcacacttggatttgcgggacgcc
gtgtgtgtggaacttcacaagacatctgccgggctgggcttcagtctggatggtgggaag
gcttctatatacggcgaccggcctctcttcatcaaaaggatctttaaaggtggcgctgct
gagcaagcaagaagaatagaagtgggagatgaaatcatttcaattggtggaaaaaccttg
attggcctcatgcactatgatgcctggaatatcattaagtctgttccagagggacctgtg
cagttgttgatcaggaagcacaggactgcagtatga
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integrated database retrieval system
