Rana temporaria (common frog): 120927356
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Entry
120927356 CDS
T07929
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120927356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120927356
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
rtem04031
]
120927356
Membrane trafficking [BR:
rtem04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
120927356
GTP-binding proteins [BR:
rtem04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
120927356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
AAA_16
Gtr1_RagA
AAA_22
GTP_EFTU
AAA
SRPRB
AAA_7
ORC3_N
NACHT
AAA_5
AAA_24
Septin
AAA_29
AAA_25
PduV-EutP
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120927356
NCBI-ProteinID:
XP_040193897
LinkDB
All DBs
Position
2:complement(388352423..388374186)
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AA seq
205 aa
AA seq
DB search
MACAWDFQFRVLLLGDSGVGKTSLLRRYTNDEFTETTGPTVGVDFCCRIEEPEDGVKVRL
QFWDTAGQERYRAVTRSYYRNAACVILLFDLTAHKTFENIHNWYQEVTERAQPNPLVLLL
LGTKSDLRDLREVTREEAQNMANSINAPYLETSARTGSNVSAALSLICRELLQAAREEKH
TTMERSIVGCSTGEEVQKPRTLCIC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgcatgggactttcagtttcgtgtcctgctgctgggggactccggagttggg
aagacttctctcttacgcagatatactaatgacgaatttacagagacaaccggacccaca
gtaggggtagacttttgttgtcgaatagaagaaccagaggatggagttaaagtcagactg
cagttctgggatacagctggccaggagcgatatcgggcagtaacaaggtcttattacaga
aatgctgcttgcgttatcctcttgtttgatctcactgctcacaagacttttgagaacatc
cacaactggtaccaggaagtgacagagcgggcccaaccgaatccactggttttattgctg
cttggaaccaaaagtgacttgcgggatcttcgagaggtcacccgagaggaggcacaaaat
atggcaaactccataaatgctccatatctagagacttctgcacgaactggtagcaatgtt
tccgcagcgctctcccttatttgcagagagctgctacaagcagcgagagaagaaaaacat
acaacaatggagcgcagcatagtgggatgctcaacaggcgaagaagtacagaaaccgaga
acgctatgcatatgctga
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integrated database retrieval system