Rana temporaria (common frog): 120927364
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Entry
120927364 CDS
T07929
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120927364 (WDTC1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120927364 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
WD40_RFWD3
TPR_2
Beta-prop_WDR90_POC16_2nd
TPR_19
Beta-prop_WDR41
TPR_BSK1_C
PAC11
NBCH_WD40
Beta-prop_Aladin
TPR_9
Beta-prop_HPS5
Beta-prop_EIPR1
ANAPC3
TPR_16
Beta-prop_RIG_2nd
TRM82_WD
Beta-prop_WDR19_1st
TPR_6
TPR_11
Beta-prop_SPT8
CFAP70_TPR_C
Beta-prop_WDR35_TULP_N
ASA1
TPR_17
Beta-prop_VPS8
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120927364
NCBI-ProteinID:
XP_040193921
LinkDB
All DBs
Position
2:389582526..389643151
Genome browser
AA seq
669 aa
AA seq
DB search
MEGINIAQDIIHRQIRERKARSFQRNHHVSDPLIRRLGLEAELQGHTGCVNCLEWNEKGD
LLASGSDDQHLMLWDPFHHKKLMSMHTGHTANIFSVKFLPHTGDRILITGAADAKVHVHD
VNSKETLHVFSEHTNRVKRVATAPMWPNTFWSAAEDGLIRQYDLRESSTHSDVLIDLTEY
CGQLVEAKCVSISPQDNNCLAVGASGPFVRLYDIRMIHSHRKNLQQTQSGLHTFCSRQKP
IPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFKQ
RPCTFLLPKSHHNSGEVQNGKTTSNGLSLYSNGLRVSDAKTVVGTTNELPPHLEKVKQKA
NDAFARQQWSQAIELYSQAMQSAPRSAMLFGNRAAAYMKRKWDGDHYDALRDCLQALVLN
PAHLKAHFRLARCLFELRYVSEALDCLEEFKAKFPEQAQSSACDALDRDIRVALFSKNDN
QDDKKGGSVRLRSGGRKDSLSEDELLLRERSLDYKHRYCGHCNTTTDIKEASFMGSNAQY
IVSGSDDGSFFIWEKETCALVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWSPRPE
IEGTDKRVVQDMEGACQANQRRMNADPLEVMLLNMGYRITGLSGGGPASGDGGSDDEDSA
EGQVQCRPS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaatcaacatcgctcaggatatcatccacaggcagatcagggaaaggaaagct
agaagctttcagagaaatcatcatgtatcagatcctttaattcgtcgactgggactagag
gcagaattacagggtcatactggttgtgtcaactgcctggaatggaacgagaagggggac
ttgctggcctctggctcagatgaccagcatttgatgctttgggatccatttcatcataag
aaacttatgtctatgcatacagggcacactgcaaacatcttctctgtcaagtttctccca
cacactggcgatcgtatcttgataactggcgcagcagatgccaaggttcacgttcatgat
gtgaactcaaaagaaaccctccacgttttttcagaacataccaaccgagtaaagcgtgtt
gccactgctcctatgtggcctaatactttctggagtgcagcagaggatggcttaatccgg
caatatgacctaagagagagcagtactcattcagatgtcttgattgatttgacggagtat
tgtggccaattagtagaagcaaaatgtgtaagcatcagtcctcaggataataactgcttg
gccgttggagccagtgggccctttgtcaggctgtacgatattcgaatgattcacagtcac
aggaagaatcttcagcagacacaatctggactacatacattttgctcgagacaaaagcct
atcccagatggagcagcacagtattatgtagcaggccaccttccagtcaagctaccagat
tacaacaaccggttacgtgttttagtggccacatatgtaaccttcagtccagatggaact
gagctattggtcaacatgggaggggagcaggtctatctgtttgatttaacgttcaagcaa
agaccttgcacatttttactacctaaatcccaccataattctggagaagttcagaatggg
aaaaccacaagcaatggacttagtttgtacagtaatggtttgcgtgtcagtgatgccaag
accgtggtggggacaacaaatgagctgccacctcatttagaaaaagtgaagcaaaaagcc
aatgatgcatttgcacgacaacagtggagccaagcaattgagttgtatagccaagccatg
cagagtgcccctcgtagtgctatgttatttggaaaccgggcagcggcatatatgaaacgc
aagtgggatggagatcactatgatgctctgagagactgccttcaagcattggtgctgaac
ccagcccatctcaaagctcactttcgactagcccgctgcttatttgagctccgctatgtc
tctgaagcactggattgtttggaggagttcaaagccaagttcccagagcaggcacaaagc
agtgcatgtgatgcacttgacagggatatcagggttgccttattctccaaaaatgacaac
caggacgataaaaaaggaggctctgttcgcctccgctcagggggcaggaaggattccctg
tctgaggacgaactgctgctgagagaacgaagcctggattataaacacagatactgtggc
cattgtaatactactacagacattaaggaagccagcttcatgggaagcaatgctcagtac
atagtgagtggatcagacgatgggtcatttttcatatgggaaaaggagacttgtgcactc
gttagggttttgcaaggagatgagtccatagttaattgtctacagccacacccaagttac
tgtttcctagcaacgagtggtattgaccctgttgtgcgattatggagcccacgtcctgag
atcgaaggcactgacaagcgagtggtgcaggatatggagggtgcctgccaagctaaccag
cggagaatgaatgctgatccactagaagtaatgcttctgaacatgggctacagaattaca
ggactcagtggagggggtccagcatctggtgatgggggatcagacgatgaggattctgct
gaaggacaagtgcaatgtcggcccagctaa
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