Rana temporaria (common frog): 120927391
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Entry
120927391 CDS
T07929
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04020
Calcium signaling pathway
rtem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120927391 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120927391 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtem04030
]
120927391 (PTAFR)
G protein-coupled receptors [BR:
rtem04030
]
Rhodopsin family
Others
Platelet activating factor
120927391 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
7TM_GPCR_Srx
DUF975
7TM_GPCR_Srd
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
120927391
NCBI-ProteinID:
XP_040193971
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All DBs
Position
2:392540287..392544284
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AA seq
352 aa
AA seq
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MSLEGNTSIEDPCNVDSEFRYKFFTVTYSIIFVFGFIANSYVLWVFAEVYPAKRLSDIKI
FMINLTVADLLFIVTLPLWIVYYNYGGNWVMPHFLCNVAGCFFFINTYCSVALLAVISYN
RFQAVTNPVEVAQSTARKKGLCISAFVWILVFGSSLFFLVTPGTNQVKANDGLNYTRCFE
GYNPENRGPVAVIHFILIAAFFVVFLVILICNVVIFRTLTTQSVAAKQSIEMKRRALYMV
VTVLGVFVICFVPHHIVHGPWTLTVLRLWHENDCGFRQVLNDAHQITLCLMSTNCVLDPI
IYCFLTKKFRKHLSQRIQTMTRRSRKFSRNTTDTNLEGTLPLKERHTSTCDL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggaaggtaataccagcatagaagacccatgtaacgtggattctgaatttaga
tacaaattctttacagtgacttacagcattatttttgtctttggctttattgctaacagc
tatgtattgtgggtcttcgcagaggtttatcctgctaaaaggctgagtgacatcaaaatt
tttatgatcaatcttactgtggccgacctgttattcatagtgactttgcccctgtggatt
gtttactataattatggaggcaactgggtaatgccacattttctctgcaatgtggcaggc
tgtttcttcttcatcaatacatattgctcagtagccttgttagcagtcatcagttacaac
agatttcaggctgtaacaaatcctgtggaagtagcacaatcaacagccaggaaaaaagga
ctgtgcatctctgcttttgtttggatacttgtatttggaagttctttgttctttcttgtt
acccctggcaccaaccaggtaaaggctaatgatgggcttaactacacccgctgctttgaa
ggatacaaccctgaaaacagaggtcccgtggctgtcatccacttcattctaattgccgct
ttctttgttgtgttcctcgtcatattgatttgtaatgtggtgatttttaggaccttgacc
acccagtcagtggcagccaaacagagcatagaaatgaaacgtcgtgctctgtatatggta
gtcacagttcttggagtttttgtgatatgttttgttccgcaccacattgtgcatggaccc
tggactctcacagtgctgagactgtggcacgagaatgactgtggctttcgacaggttctg
aatgatgcacatcaaatcacattgtgccttatgagtaccaactgtgtgctggaccctatt
atctattgctttctcaccaagaagtttcggaaacacctctctcaacgcatccagactatg
acaagaagaagtcgtaagttctcaagaaatactactgacactaacttagaaggcacatta
ccactcaaagaaaggcacactagcacatgtgacctttag
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