Rana temporaria (common frog): 120927417
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Entry
120927417 CDS
T07929
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120927417 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtem01007
]
120927417 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120927417 (TARS1)
Enzymes [BR:
rtem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120927417 (TARS1)
Amino acid related enzymes [BR:
rtem01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120927417 (TARS1)
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120927417 (TARS1)
Prokaryotic type
120927417 (TARS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120927417
NCBI-ProteinID:
XP_040194014
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All DBs
Position
1:54360569..54450457
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AA seq
720 aa
AA seq
DB search
MSENVVAQMEKMSVSKPNPEGGKHKEGGKKKGKDGSGDGSRAEMNPWPQYINQRLELYNK
LKAEHDAIMAERTAKDSKPIKVTLPDGKQVDAESWKTTPYQVAAGISQGLADNTVVAKVN
KVVWDLDRPLEEDCTLELLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIESGF
YYDMFLDEGGVSSNDFTSLENLCKKIMKEKQQFERLEISKETLLEMFKYNKFKCRILNEK
VDTPTTTVYRCGPLIDLCRGPHVRHTGKIKAFKIHKNSSTYWEGKADMETLQRIYGISFP
DPKMLKEWEKFQEEAKNRDHRKIGRDQELFFFHELSPGSCFFLPKGAFIYNQLINFIREE
YRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDHR
PRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDFL
RYIYNAFGFTFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWVLNPGDGAFYGPK
IDIQIKDAIGRYHQCATIQLDFQLPIRFDLTYVSPDCDDKKRPVIIHRAILGSVERMIAI
LTENYGGKWPLWLSPLQVMVVPVGPTCDEYAQKVKEQFHHAGLMADVDLDPGATLNKKIR
NAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTVAESIQRLLQLKESRCKNAEEEF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaacgtggtggcacagatggagaagatgagtgtcagcaagccaaatccagaa
ggagggaaacacaaagaaggaggcaagaagaaaggcaaggacggttctggtgatggaagc
cgggcagagatgaatccatggccccagtacatcaaccagagacttgaattatacaacaaa
ctaaaagcagaacatgacgccattatggcagagaggactgcaaaggacagcaagcccatc
aaggtgaccttaccggatgggaagcaagtggatgcggagtcttggaagaccaccccatac
caagtagctgctggcatcagtcaaggtcttgctgataacacggttgtcgcaaaggtgaat
aaagtggtttgggacctcgatcgccctctggaagaggactgcacattggaactgctgaaa
tttgacgatgaagaggcccaggcggtatactggcattccagcgcacacattatgggagaa
gctatggaacgggtgtatggtggatgcttatgctatggccctcctattgaaagtggattt
tattatgacatgtttctggatgaaggaggggtgtccagcaacgacttcaccagcttggaa
aatctgtgtaaaaagattatgaaggagaagcagcagtttgagaggttggagatctccaaa
gaaactcttctagagatgtttaagtacaacaagttcaagtgcagaatcttaaatgagaaa
gtggacactccaaccaccacagtatacagatgtggccccttaatcgatctttgcagagga
ccccatgtgaggcatactggaaagattaaagctttcaagatacacaagaattcttccact
tactgggaagggaaggctgatatggaaaccctgcagagaatttatgggatttcattccct
gacccaaaaatgctaaaagaatgggagaagttccaggaggaggccaagaacagagaccac
cggaagattggcagggaccaggagctgtttttctttcatgagctgagtcccggaagttgt
ttcttccttcccaagggagcgttcatttataaccagctgattaacttcatcagggaagag
tataggaagaggggcttccaagaggtggtcacccccaacgtgtataacagcaagctatgg
cagacatccggacactggcaacattacagtgaaaacatgttctcatttgaagtggagaag
gaaatctttgcactgaagcccatgaactgcccaggacattgtttgatgtttgaccaccgg
cctcgttcctggagggagctaccactgaggatggcagactttggagttcttcaccgcaat
gaactgtctggtgctctcacaggactcactcgagtcaggcgcttccagcaagacgatgcc
cacattttctgtgccatggagcagattgaagaagagataaagagctgtctggatttcctc
cgctacatctacaatgcctttggttttaccttcaaattaaacctttccacccgcccagag
aagttcctcggtgacattgaagtttggaatcaggctgagaagcaacttgagaacagtttg
aatgaatttggagagaagtgggtgttgaatcctggtgatggagctttctatggaccaaag
attgatatccagattaaagatgccattggccgttaccatcaatgtgccacaattcagttg
gatttccagctccccattaggtttgatctgacctatgtcagccctgattgcgatgataag
aagaggccggttatcattcaccgcgctattcttggatctgtggaacgcatgattgctatt
ctgacagagaactacggaggaaaatggcctctgtggctttctccgctgcaagtgatggtg
gtgcccgtggggccgacatgtgacgagtacgcacaaaaggtcaaggagcagttccaccat
gctgggttgatggcagacgtagaccttgatccaggcgccactctcaataagaagatccgc
aacgcacagcttgcgcagtataattttattctcgtggtcggagagaaggagaaaaccagc
gggacagtaaacatccgcacacgagataacaaggtgcacggcgagcgcacagtcgcagaa
tccatccagaggctcctccagctgaaagaatccagatgtaaaaacgcagaagaggagttt
taa
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