Rana temporaria (common frog): 120927427
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Entry
120927427 CDS
T07929
Symbol
USP9X
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120927427 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120927427 (USP9X)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120927427 (USP9X)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120927427 (USP9X)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120927427 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
120927427
NCBI-ProteinID:
XP_040194033
LinkDB
All DBs
Position
2:complement(397487008..397803218)
Genome browser
AA seq
2554 aa
AA seq
DB search
MTATTRGSPVGGNESQGQAPDGQSQPPLQQNQTSSPDSSNENSPVSPPDDQTQGDAPPPL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMNGSALNVQIIAALIKPFGQCYDFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSSYMDSMRQYSKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILNRIKANSAHTKVELFIGGELIDPSEDRKLIGQLNLKDKTL
ITAKLTQISANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHHRYISF
LWQVADLGSNLNMPPLRDGARVLMKLMPPDNTIVEKLRAICLDHAKLGESSLSSSLDSLF
FGQSASQVLYLTEVVYALLMPANAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRSAYLNALKVAKLLLTAIGYGHVRAVAEACQPVEGSNPVSPATHDQAVVLQNALQN
IPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAIQKVIWASGCGSVQLVFSANEEI
SKIYEKANAGNEPDPEDEQVCCEALEAMTLCFALIPTALETLSKEKAWQTFIIDLLLHCQ
SKLVRQMAQEQFFLMSTRCCMGHRPLIFFITLLFTVLGSTARERAKHAGDYFTLLRHLLN
YAYNSNINIPNAEVLLNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTKELLAFQTPE
KKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMKTGELPAEQAIPVCSSPATINAGFEL
LVALAVGCVRNLRQIVDTLNEMYYSGCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMN
SVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGYPHQYEDKPS
LNKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEF
FNSLVDSLDEALKALGHPTMLSKVLGGSFADQKXCQGCPHRYECEESFTTLNVDIRNHQN
LLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECA
IKFNDYFEFPRELDMEPYTVAGVAKLEGDDVHPENQVIPNEQTENEPPGSTKYRLVGVLV
HSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVF
DHMMKRMSYRRQKRWWNAYILFYERMDTLDKDNELIKYINELTITSKPHQIKMPSAIERS
VRKQNVQFMHNRMQFSLEYFQFIKKLLTCNSVYLNPPPGQEHLMPEPEEITMISIQLAAK
FLFTTGFHTKKVVRGPASDWYDALCILLRHSKNVRYWFAHGVLFAYPNRFSEYLLECPSA
EVRGAFAKLVVFIAHFSLQDGPCTLPFASPGPSSQAYDNLSLSDQLLRAVLNLLRREVSE
HGRHLQQYFNLFVMYANLGMQEKTQLLKLNVPATFMLVAMDEGPGPPIKYQYAELGKLYT
VVSQLIRCCDVSSRMQSSINGNPPLSNPYGDPNLSQPLMPLQQNVGRGCCLLKTSYVKKI
YXDCSNSEETIKLLRFCCWENPQFSSNSSQELLWQVAYSYTYELRPYLDLLLQILLIEDS
WQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNG
DLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAK
ACELCPEEEPDDPDAPEEHESSPPEDAPLYPHSPGSQYQQNNHLHGQPYTGPAAHHMNNP
NPNPNPNPNPQRAGQRAPEEFEGSEDVPLIQTKD
NT seq
7665 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggttggagggaatgaaagtcaaggccaagctccc
gatggacagtcacagcctccactccaacagaatcagacttcttcacctgattcttccaat
gaaaactccccagttagccctccagatgatcagacacaaggggatgcaccacctccactg
gaggatgaggaacccgcctttcctcacactgacttggctaagctggatgacatgatcaac
agacctcgctgggttgttccagttttgcctaaaggtgaattagaagttcttttagaagct
gctattgatcttagtaaaaaaggccttgatgtgaaaagtgaagcatgccaacgattcttt
agagatggtctaacaatatcttttacaaaaattcttactgatgaggcagtgagtggctgg
aagtttgagatccataggtgtataattaacaatactcatcgccttgtggaactatgtgtg
gccaagctttcccaagattggtttcctcttcttgaattactagcaatggccttaaatcct
cattgtaaatttcatatctacaatggtacacgtccatcagagactgtcccagctggagtt
cagttggcagaagatgagctgtttgcccgtcctcctgatccacgttccccaaagggctgg
ttagtagacctcattaataaatttggcacattaaacgggttccagattctgcatgatcgc
tttatgaatggctcagctttgaatgttcaaatcatcgcagctcttataaaaccatttgga
cagtgctatgattttttaacacttcatacagtcaagaaatactttcttccaattatagaa
atggtccctcaatttctagaaaatttaactgacgaagagttgaaaaaagaagcaaaaaat
gaagccaaaaatgatgcactatctatgattataaaatctcttaaaaacttagcttcccgt
gttccaggacaagaagaaactgtcaaaaatttagaaatttttaggcttaaaatgattctt
aggttgttacaaatttcatcctttaatggaaaaatgaatgcacttaatgaagtgaacaaa
gtaatatcaagtgtgtcctattacacacacagacatggaaatccagaggaggaggagtgg
ctgactgccgagcgtatggctgaatggatccaacagaacaacattctatcaattgtttta
cgggatagtcttcatcaacctcaatatgtggagaaattagaaaaaattcttaggtttgtc
atcaaggaaaaagcacttactctgcaagatctggacaacatttgggcagcacaggcagga
aaacatgaagccattgtaaaaaatgtccatgatttacttgccaagttggcgtgggatttt
tctcctgaacaacttgaccatctttttgattgttttaaggctagttggacaaatgcaagc
aaaaaacaacgtgagaagctactggagttaatacgccggctagcagaagatgacaaagat
ggtgtaatggctcataaggttttaaaccttctgtggaatttagctcacagtgatgatgtg
cccgttgatataatggaccaagccttgagtgcccatataaaaattttggattacagctgc
tcgcaggatcgagatacacagaaaattcagtggatagatcgttttatagaagagctacgt
acaaatgacaaatgggtcataccagcacttaaacaaattagagaaatttgcagtttattt
ggtgaagcacctcagaatctaagccagacacagcgcagtccgcatgttttctacagacat
gatttaataaaccaactccagcataaccatgcacttgttacattagttgcagaaaatctc
tcttcatatatggatagcatgcgacagtactcaaaagaacatggcgagtatgatccccag
actgtgaggccaggaagtcgatatagtcatgtgcaggaagtccaggagcgactaaatttt
ctgaggtttttattgaaggatggtcagctttggctttgtgcaccccaagcaaaacagatt
tggaagtgcttggctgaaaacgcagtttacctttgtgaccgtgaagcctgtttcaagtgg
tactccaagctcatgggcgatgagccagatttggacccagatatcaataaagatttcttt
gaaaacaacgtgctacagctggatccatctctcctaacagaaaatggcatgaagtgcttt
gagcgtttttttaaagctgttaactgtcgtgaaggaaaacttgtagcaaaacgcagagcc
tacatgatggatgatttagagcttatagggcttgattatctctggagggttgtaattcag
ggtagcgatgacattgcaagccgagcaatagatcttttaaaagaaatctacaccaacctc
ggacccaggttacaagtaaatcaggtggagatacatgaagacttcattcaatcctgcttt
gatcgtttaaaagcttcatatgacacattgtgtgttttggacggtgacaaagacagtatt
aattgtgcaagacaagaagcaatacgaatggtcagggtgctgactgtcctgaaagaatat
ataaatgaatgtgatagcgactaccatgaagagaggacaattcttccaatgtctagggct
ttccgggggaagcacattaccctggttgtgcgatttccaaatcaaggcagacaggtggag
gatttggatatttggtctcacacaaatgacacaataggttcagttcgtcgctgcatactg
aaccgtatcaaagccaacagcgcacatacaaaggttgaactgtttattggtggagagctt
atagatccttctgaagacagaaaactaattggccagctaaatttgaaagataaaacgcta
attacagccaagctaacacaaataagcgcaaacatgccttcaagtcctgacagttcttca
gattcctcaactggctctcctggcaatcatggaaaccactacagtgatggtcctaatcct
gaagttgaaagctgcctgcctggagtgataatgtcattacatcaccgatatatctccttc
ctttggcaagttgcagacttgggcagcaacctaaatatgcccccgctacgtgatggggca
cgtgtgctgatgaaacttatgccaccagacaatactatagtagagaaacttcgagcaatt
tgtttagatcatgctaaacttggagaaagtagcttgagttcatccttagattcgttattt
tttggccaatcggcatctcaagttttatatctgacagaggttgtttatgccttgttgatg
cctgccaatgctcccctgggagaagatgcaagtgattttcagtacaactttctcaaaagt
ggtggtttgcctcttgtgttgagcatgcttactcggaataacttcctgccaaatgccgat
atggaaacaagaagaagtgcttatcttaatgcactgaaagttgccaaattgctgcttact
gcgattgggtatggccatgtccgggctgttgctgaggcttgtcagccagtggaaggatca
aatcctgtctcaccggctacacatgatcaagcagtggtgctacaaaatgccctgcaaaac
attcctaatccaacttcagaatgtatgctgagaaatgtagcaatacgccttgcacagcaa
atatcggatgaggcttctaagtatatcccagatatttgtgtcattcgagcaatacagaaa
gtaatctgggcctccggctgtggttcagttcaattggtgttctctgccaatgaggaaata
agcaaaatttatgagaaggcaaatgctggaaatgaacctgatcctgaggatgaacaagtt
tgttgtgaagctctggaggcaatgaccttgtgttttgctttgataccaacagcattggaa
acactcagcaaagagaaagcatggcagactttcatcattgacttgctacttcactgtcaa
agcaaacttgttagacaaatggcgcaggaacagttctttctcatgtctacaagatgttgt
atgggacatcgacctcttattttttttattacgcttctgttcacagttcttgggagtact
gctagagagcgggctaaacatgctggggattatttcaccttgttaaggcaccttctgaat
tatgcatacaacagcaacattaacattcccaatgctgaggttctgctcaacaatgaaata
gattggctcaaaaggataagagatgatgttaaaagaactggtgaaacgggtattgaggag
accattcttgaaggtcacttaggagtaacaaaggaattgttggcattccagactccagag
aagaaataccacattggatgtgagaaagggggtgctaatcttattaaggaattgattgat
gacttcatatttccagcatccaacgtctatttgcagtatatgaagaccggagagctacca
gctgagcaagctatccccgtctgcagttcaccagccactattaatgcaggttttgagctt
ctggttgcattagctgtgggatgtgttcggaacctcagacagattgtggatacattaaat
gaaatgtattactcaggttgtgaagcacttacagaatgggagtatctgcctccagttgga
ccgcggccccccaagggttttgtggggctcaaaaatgctggggctacatgctacatgaac
tctgttatccagcaactgtatatgatacctgccattcgtaatggaattcttgctattgaa
ggcactggcagtgatgttgacgatgacatgtctggggatgaaaaacaggacaatgagagc
aacgtagacccgcgggatgatgtttttggttatcctcaccaatatgaagataaaccttca
cttaataaaaccgaggacaggaaagaatacaatattggtgtacttaggcatctacaggtc
atctttgggcatttggctgcatccagattgcagtattatgttcctagaggattttggaaa
cagttcaggctttggggtgaacctgttaacctgagggagcaacacgatgctttagaattt
tttaattcccttgtcgatagtttagatgaagcattaaaagcattaggtcatccaaccatg
ttaagtaaagttttaggaggatcctttgctgatcaaaaantttgtcaagggtgcccccat
aggtacgaatgtgaagaatcctttacaaccctgaatgtagatattaggaaccaccaaaac
ctgcttgactcaatggaacagtatgtcaaaggagacctactggaaggtgcaaatgcttat
cactgtgaaaaatgcaacaaaaaggttgatacagtgaagcgtttactgatcaagaagctg
cctcctgttctagccatccagctgaaacgctttgactatgactgggaaagggaatgtgca
attaaattcaatgactattttgagtttccacgcgagctagatatggagccatatacagtg
gctggtgtagcaaagttagaaggagatgatgtgcaccctgaaaatcaggtcattcccaat
gaacagactgaaaatgaacctcctggaagcactaaatacagattggttggggtgttggtg
cacagtgggcaggccagtggaggtcattactattcttacatcatccaaagaaatggagga
gatggggaaaagaatcgctggtataagtttgatgatggggatgtcacagaatgcaaaatg
gatgatgacgaggaaatgaagaaccagtgctttggcggagagtacatgggtgaagtgttt
gaccacatgatgaaaagaatgtcatatcggcgtcagaaaaggtggtggaatgcctatata
cttttttatgaacgcatggacactctagataaagacaacgagctgatcaaatatataaat
gagcttacaatcacatcaaaaccccaccagatcaagatgccatcggccattgagcgaagt
gtacgaaagcaaaatgtgcaattcatgcataaccgaatgcaattcagcttagaatatttt
cagtttataaagaagttactaacgtgtaacagtgtctacctgaatcctcccccaggacaa
gaacatttgatgcctgagccagaagaaataaccatgattagtatacagcttgctgctaaa
ttcttgtttaccacaggatttcatacaaagaaagttgttcgtggtcctgctagtgactgg
tacgatgcattatgcatcctactccgccatagcaagaatgtccgctactggtttgcacat
ggtgtcctttttgcttatccaaatcgtttctctgagtatcttttggagtgccctagtgct
gaagtcagaggagcatttgcaaaacttgtagtatttattgcacacttttctttacaagat
ggcccttgcaccttaccctttgcttctcctggaccatcaagtcaggcttatgataatttg
agtctgagtgaccagttgctgagagctgtacttaaccttctcagaagagaagtgtctgag
catggtcgtcatctacagcagtacttcaaccttttcgtcatgtatgccaaccttggcatg
caagaaaagacccagcttttgaaactcaatgtgcctgcaacatttatgctagtagcaatg
gatgaagggcctggtcctccaatcaaataccagtatgctgaattgggcaaattgtacact
gtagtgtcacagctaattcgttgttgcgatgtatcatcgcgtatgcagtcttctattaat
ggtaatccaccactgtctaacccctatggagaccccaacctttctcagcctcttatgcca
ctgcagcaaaatgtgggcagaggttgttgtttgttgaaaaccagttatgtgaaaaaaatt
tatngagactgcagcaactcagaagagactatcaaattgcttcgattttgttgctgggaa
aatccccagttctcctctaacagttctcaggaactgctgtggcaggtggcatattcttac
acttatgagcttaggccctatttggaccttctgctccaaatcttgttgattgaggattct
tggcagacccataggattcacaatgcacttaaaggaataccagatgaccgagatggtttg
ttcgataccatccaacgctccaagaaccactatcagaagagagcttatcagtgcataaaa
tgtatggtggctctctttagcaactgttccgtcgcataccaaatactgcagagcaatgga
gatttaaaaaggaaatggacgtgggcagtggaatggttgggggatgagttggagcgcaga
ccttacactggcaatcctcaatacacatataacaactggtccccgccagtgcaaagcaat
gaaacttcaaatggctactttttagagcggtcacacagtgctaggatgactcttgcaaag
gcttgtgagctgtgcccagaagaggagccagatgacccagatgcccctgaggaacatgaa
tcctccccacctgaagatgccccattgtatccccattcacctggttctcagtatcagcag
aataaccatttgcatggacaaccatataccggcccagcagcacaccacatgaacaatccc
aatcctaatcctaatcctaatcccaatcctcagcgggcaggccagcgagcaccagaagaa
tttgaaggcagtgaagatgtccccttaattcaaactaaagattag
DBGET
integrated database retrieval system
