Rana temporaria (common frog): 120927536
Help
Entry
120927536 CDS
T07929
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120927536 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120927536 (RNF43)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120927536 (RNF43)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120927536 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120927536
NCBI-ProteinID:
XP_040194215
LinkDB
All DBs
Position
2:complement(429008660..429077151)
Genome browser
AA seq
690 aa
AA seq
DB search
MRWLVAPLPGLWMPGAGCSMSRGRLVSLCVLLLILSALQASLAVSQTRALIRVFPLRMDT
PNFTVEGLFAKVADVSSAEGRLFQFHPLSLCNASDDEPPKFTFISIVKLESPERSPQPCL
SLASKVRLAGERGSRAILFDISDDEGAADQLQQPAGLSQPVVLLRGRDAERLMNLVHNNT
EALVMIEVPEQPKWPDHDIWILVTVVGTVSVIVLYSVIRLRCKQTPSQDSLQQQTSLAIS
RLGTRKYQPRRSRDWRANGGKVETASTSSSVPVCAVCLEEFSEGQDLRVLPCCHEYHLEC
VDPWLRQNHTCPLCMFDILEVNTPSRPEQSRPPAQPQFWRPYPGAAHLQYPPQPHSTSLV
YPPMNNRIFVSRTPYFLGTGQPWDAAVPRHHRWAPEGPREVIIPPHSQVSSGYLPDDPGS
DSSSGPFNGGSSSENCTDVSLRCLQGSSSSSCHSSQSNPGDSPPPALASILLPQNDLPGF
NTVVPTQNSYASHVHYHQHRHHHYRRHHSVSHPHRAKRRSRPSRGEVRTDLGCQREHRTS
NSGESRSLLTRKEPRTLSSKHCPDPKTNREAIRQSQSSPLSPSQTHEPHEPEPSTSLRNH
RAEPLTRSHRKKRSSASGQPPPYSTRNFCTNLGVQHCERTQPMWVEGGRIVHAKLNTHRE
NTAMMHLYHPPHHDHGADTEGIEAVCEHAV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggttagtggcccctctcccgggactatggatgccgggcgccgggtgcagtatg
agtagaggccggctggtgtccctgtgtgtcctcctcctcatcctcagcgctctacaggcg
agcctcgccgtctcccagacccgagccctcatccgggtcttccccctcaggatggacacc
cccaacttcaccgtggaggggctcttcgctaaggtggccgacgtcagctctgccgagggc
aggctcttccagtttcacccactgtccttgtgcaatgctagtgatgacgagccgccaaag
ttcacattcatctcaattgtcaaactggagagcccggagcgttctccccagccatgttta
tctttggcaagcaaggtccgccttgcaggggagagaggatctcgcgcaatactgtttgat
attagtgatgatgagggagctgcagaccagttacagcaaccagctggattaagtcagcct
gtggtgctattacggggccgtgatgctgaacgtttgatgaaccttgtgcacaacaacaca
gaggcgctggtgatgattgaggttccggagcagcccaagtggcctgaccatgacatctgg
attctggtcacagtggtgggcacagtctcggtcatcgtcctatactctgtaatccgactt
cgctgcaagcagaccccatcacaggactccttacaacagcagacttcgttggctataagc
cgacttggtaccagaaaataccaacctcgaaggtcaagagactggcgtgcaaatggtggc
aaagtggaaactgcaagcaccagcagttctgtgccagtgtgtgctgtatgcctagaggaa
ttctcagaaggacaggacttgagggtattgccttgctgccatgagtatcatctggagtgt
gttgatccatggctaaggcagaaccacacctgtcccctgtgtatgtttgacatcttagaa
gtgaacaccccttcacgtcccgaacagtcccgtccccctgcgcagccacagttttggaga
ccttacccaggtgctgctcatttgcagtatcctccacagccccactctacatccttagtg
tatcctccaatgaataataggatatttgtgtcccgcacaccctattttcttggcactgga
cagccctgggatgcagcagtgcctcgccatcaccgatgggcaccagagggccccagagaa
gtgataatcccccctcactctcaggtttccagtggatatttgccagatgacccaggcagt
gacagcagctcaggtccattcaatggtgggtcctccagtgagaactgtacagatgtcagt
ctacgttgcctacaaggttcctcctcctcttcttgccacagctcccagagcaacccaggg
gattctccccctccagcacttgcctctattcttctacctcagaatgatctaccaggattc
aacactgttgtgccaacacagaattcttatgctagtcatgttcattatcatcagcatcga
catcaccactacagacgtcaccactctgtgtcccacccccacagagccaaaaggaggtct
cgaccctctagaggagaggtcaggacggacttgggttgtcagagggaacacaggacatct
aatagtggagaatctagatctcttttaacgcgtaaggaaccaaggactctatcatctaaa
cattgccctgatccaaaaactaatcgggaggctatcaggcaaagccagtcctcaccgctg
tctccttcacaaacacatgagccacatgaacctgaaccctcaacttctttaagaaaccac
agggctgaacctttaactagaagtcaccgaaagaaaagatcctctgcatcagggcaacct
cctccctacagtacccgcaacttctgcaccaaccttggtgttcagcactgtgaaagaact
cagcccatgtgggtggagggtggcagaattgtacatgctaaactaaacacgcacagagaa
aacacagcaatgatgcacttgtatcacccacctcatcatgaccatggtgctgatactgaa
gggattgaagctgtttgtgaacatgcagtgtaa
DBGET
integrated database retrieval system
