Rana temporaria (common frog): 120927555
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Entry
120927555 CDS
T07929
Symbol
STX1A
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120927555 (STX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120927555 (STX1A)
Membrane trafficking [BR:
rtem04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120927555 (STX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Prominin
PspA_IM30
Spectrin_Anc-1
GNVR
DUF5856
Ferritin
Laminin_II
Lzipper-MIP1
Herpes_UL25
ETRAMP
Motif
Other DBs
NCBI-GeneID:
120927555
NCBI-ProteinID:
XP_040194249
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All DBs
Position
2:431607602..431803385
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AA seq
288 aa
AA seq
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MKDRTRELRAAKDSDEDDEVAVSLDRDKFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
ILASPNPDEKTKVELEELMSDIKKTANKVRSKLKNIEQSIEQEEALNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSG
IIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASTFGGIFG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgcacccgggagctccgtgctgctaaagacagtgatgaagatgatgaagtg
gctgtcagtctggatcgagacaaattcatggatgaattttttgaacaggtggaggaaatc
agaggttttattgacaaaattgctgagaatgtagaggaagtaaaaagaaagcacagtgct
atccttgcttctcccaacccagatgagaaaaccaaggtagaattggaagagttgatgtcg
gacatcaaaaagacagccaacaaggttcgctccaagctgaaaaatattgaacaaagtatc
gaacaagaggaagccctgaaccgttcctctgctgatttgcgcatcaggaagacacagcat
tcaacgctgtctcgtaagtttgtagaagtcatgtcggagtataatgctacgcagtccgat
tatcgcgagcgctgcaaaggccgcattcagagacagctagaaatcactggtagaaccacg
acgagtgaggagctggaggatatgcttgaaagtggaaaccccgccatcttctcatcaggg
atcatcatggactcgaacattactaaacaagctctgaatgaaattgagactcggcacagt
gagatcattaagttggagaacagcatccgggaactccatgacatgttcatggatatggcg
atgcttgtagagagccagggagagatgattgatcgcatagaatataatgtggaacatgct
gtggattacgtggaaagagctgtctccgacaccaaaaaggctgtcaagtaccagagtaaa
gcccggaggaagaagatcatgatcataatctgctgtgtggtgcttggtattgtcatcgct
tcaacgttcggagggatttttggatag
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