Rana temporaria (common frog): 120927585
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Entry
120927585 CDS
T07929
Symbol
HIC1
Name
(RefSeq) hypermethylated in cancer 1 protein isoform X1
KO
K24384
hypermethylated in cancer protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120927585 (HIC1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120927585 (HIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_15
zf-C2H2_3rep
zf-Di19
zf-C2H2_16
Zf-C2H2_ZNF451
zf-C2H2_11
TRASH_HVO_1752_C
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
120927585
NCBI-ProteinID:
XP_040194297
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All DBs
Position
2:complement(435108243..435121728)
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AA seq
685 aa
AA seq
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MTAEYCYPLPERKGKRSRRPLTRRTPSWDHLHQGMGFREDPQGGQLNTMLDPMEVPSHAR
QLLLQLNSQRTKGFLCDVIIVVQNALFRAHKNILAASSVYLKSLVVHDNLINLDHEMVSP
SIFRIILDFIYTGRLGDAEPSSEQLFGAVLAAASYLQISDLVSLCKKKLKRNGKYCHVRT
AGYPTFGSLGRGLRATTPVIQSCFNSTPRPIDITSGEPVNPMNTHCGELYASVSQGNQLH
QHGLCPPERHCSPLCGLDLSKKSPSRPSAQHHPDGDNREPSVPDSPPVAASVLTNHSSYK
EPSHPYQKLESSSSTPPTQHSESYRNNVPNNHLSRTESRDLMFDWMKPEPMVNYVDESDR
EKDLDREDKGEGSPLSQQPRYPSIESNEPDDDKSTSEETGSSGDPSPSANLERYHCNHLY
EPESYGDNLYVCIPCGKGFPNSEQLNAHVEAHNEEELYHKDSMDQPLPFLDKSNQSLGDI
IRPYRCSSCEKSYKDPATLRQHEKTHWLTRPYPCSICGKKFTQRGTMTRHMRSHLGLKPF
ACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHTTGPDGKPKL
DFSDSVYAMAKFTADHLGLKQEKAAEILSQTSHFLNDPKTIESLYPLAKFTAEHLGLTQE
KAAEVLSQSSHLGADSRIIERFSSP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgagtattgctacccattgccggagaggaaggggaagaggagccggagaccg
ctgaccaggagaacaccatcctgggaccatctccaccagggaatgggtttcagagaggat
ccccaaggtggacaattgaacacgatgctggatcctatggaggtaccaagtcatgcgaga
cagcttctcctgcagctgaacagccagaggactaaaggcttcctgtgtgatgtgatcatt
gtggtacagaatgccctgttccgggcacacaagaacattttagctgctagcagcgtctac
ttgaagtcgctggttgttcatgataacctgatcaacctggaccacgagatggtgagcccc
agcatcttcaggatcatcctggacttcatctacacggggaggctaggggatgccgagccc
agcagcgagcagctgtttggggcagtattggcagctgccagctacctccagatctctgac
ctggtatctctgtgcaagaagaagctaaagagaaatggcaagtactgccatgtaaggaca
gcaggctacccaacatttgggagtcttggaaggggcttaagggccacaacgcctgttatc
cagtcttgctttaactccacgcctagacctatagacataacatcaggtgagcctgtgaac
cccatgaacacacattgtggagagctctatgcctcggtgtctcaggggaatcagctgcac
cagcatggactttgccctccagaaaggcattgctctccattgtgtggactggatctttct
aagaaaagccccagccggccttctgcccagcaccatccagatggtgacaacagagagccc
tcagtcccagatagtcctccagtagctgcaagtgttctcaccaaccacagctcctacaaa
gagccatcccacccttaccaaaagctggaaagcagcagtagtaccccacctacccagcac
tcagagtcctatagaaacaacgtccctaataaccaccttagcaggactgagagcagagat
ctgatgtttgattggatgaagcctgaaccaatggtcaactatgtggatgagagtgacagg
gagaaggatctggacagagaagacaaaggtgagggctcccctttatctcagcaacccaga
taccccagcattgagagtaatgagcctgatgatgataaaagcaccagtgaagagactggc
agcagtggggacccttcaccctctgccaacctggagagataccactgcaaccatctctat
gagccagaaagctatggagacaacctctatgtctgcattccttgtgggaaggggttcccc
aacagtgaacaactcaatgcccatgtggaagctcataacgaggaagagctgtaccataaa
gacagcatggaccaacctttgcccttcctagacaagtccaaccagagcttaggggacatc
ataagaccctaccgctgctcttcctgtgagaagtcctacaaagacccggccacccttcgc
cagcacgagaagacccattggctaactcgcccatacccatgcagcatctgcgggaagaag
ttcacccaaaggggcaccatgacccgtcacatgaggagccacctgggcctcaaaccattt
gcctgcgatgcttgtggcatgcgcttcacccgccagtaccggctgacagagcacatgagg
atccattctggggaaaagccatatgaatgccaggtgtgtgggggcaagtttgcccagcaa
aggaacctcattagccacatgaaaatgcataccacgggaccagatggcaaacccaagctg
gacttttccgatagtgtctatgccatggccaagtttacagctgaccacttgggcttgaag
caagagaaagctgctgagatcctctcccagacctcacacttcctcaatgaccccaaaacc
atagaaagtttgtaccccttggccaagttcactgcagagcatttgggactgacccaggag
aaggcagcagaggtgttaagccaaagttcccacctgggcgctgatagcaggatcatagag
aggttctcctccccataa
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