Rana temporaria (common frog): 120927593
Help
Entry
120927593 CDS
T07929
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03030
DNA replication
rtem03420
Nucleotide excision repair
rtem03430
Mismatch repair
rtem03440
Homologous recombination
rtem03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120927593 (RPA1)
03420 Nucleotide excision repair
120927593 (RPA1)
03430 Mismatch repair
120927593 (RPA1)
03440 Homologous recombination
120927593 (RPA1)
03460 Fanconi anemia pathway
120927593 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120927593 (RPA1)
03032 DNA replication proteins [BR:
rtem03032
]
120927593 (RPA1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120927593 (RPA1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120927593 (RPA1)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120927593 (RPA1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120927593 (RPA1)
MMR (mismatch excision repair)
120927593 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120927593 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
120927593
NCBI-ProteinID:
XP_040194306
LinkDB
All DBs
Position
2:complement(437502287..437596707)
Genome browser
AA seq
612 aa
AA seq
DB search
MALPKLSEGSIAGILQGETSLHPILQVINIRPINTATGPPRFRLLMSDGLNTLSSFMLAT
QLNSLVDNNLLAANCICKVSRYIVNNLKDGRRVVIVMEMEVLKEANSVNGKIGNPQPYND
GQTATTPAAPASVPAPAPVPVQSKPVQNSAPPPFMNRGVSKPFGGGGNFSTPGGSQAKVV
PIASLNPYQSKWTIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKF
FSILEVNKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETSVIPCDDSSDVPTVQFEFVPI
SELENKNKDTLLDIIGVCKSFDEVTKVTIKSNNREVSRRNIYLMDTSGKMVSTTLWGEDA
EKFDGSRLPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQSLEGT
SISESRSSGGGGNTNWKSLLEVKNENLGHGDKADYFSSVATIVYLRKENCMYQACPSQDC
NKKVIDQQNGLFRCEKCDKEFPNFKYRLILSANIADFGENQWITCFQEAAESILGQNAMY
LGELKEKNEQAFEEVFQNANFRSYTFRVRVKLETYNDESRIKATAMDVKPVDHKEYSRRL
ILNIRKLAAQGV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcactacccaaactcagcgagggctccattgcgggtattctgcaaggggagacttca
ttacatcctattttgcaagttattaacattcgtccgatcaacactgctacaggtcctcca
cgattcagattgctgatgagcgatgggttaaacacactttcatctttcatgttggctacc
cagttgaactctcttgtggataacaatctcctggcagcgaactgtatctgtaaggtctcc
cgatacattgtgaacaaccttaaagatggaagacgcgtggtcatagtaatggagatggaa
gtactgaaggaagcaaattcggttaatgggaagattgggaatcctcaaccttacaatgat
ggtcagacagcaacaactccagcagctccagcttctgttcctgctcctgctcctgtacct
gtacagagtaaaccagttcagaactcagctccccctccttttatgaacagaggagtatct
aaaccgtttggcgggggaggtaattttagtacccctggtggatcacaagcaaaggtggtg
ccaattgccagtctaaacccataccagtcaaagtggactatacgtgctcgagttaccaac
aaaggtcagattcgcacttggagcaactctcgaggggaggggaagctgttttctattgag
atggtggatgagagtggcgagatccgtgctactgctttcaacgagcaagccgacaagttt
ttttcaattcttgaagtgaataaggtatattacttctcaaaaggaactttaaagattgct
aacaaacagtatacagctgtaaagaatgactatgaaatgacgttcaatagcgaaacttct
gttattccgtgtgatgactcctctgatgtcccaacggtgcagtttgaatttgttcccatt
tctgagttggaaaacaaaaacaaggacacactactagacattattggggtttgtaagagt
tttgacgaggttaccaaggtgactataaaatccaacaaccgcgaagtctcaaggcgaaat
atttatttaatggacacgtcgggcaagatggtctcaaccactttgtggggtgaagatgca
gaaaaatttgatggctccagactacctgttgttgcaatcaaaggagcacggctgtctgac
tttggagggcggtctttgtcagtcttgtcatctagtactgtcatgatcaatccagatatt
cctgaggcgttcaagctcagaggatggtttgattcagagggccagtcattagaaggcaca
tcgatctcagagtctcgcagtagtggaggaggaggaaataccaactggaagtccctgctg
gaagtgaagaatgagaatctgggacatggtgataaagctgattatttttctagtgttgcc
accattgtgtatcttcggaaggagaattgcatgtatcaggcgtgcccttcacaggattgc
aataagaaagtcatagaccagcagaatggcctctttcgctgtgaaaagtgtgacaaggag
tttcctaactttaagtatcgcctcattctgtcagcaaacattgcagactttggggagaat
cagtggattacatgcttccaggaagcagctgaatcaattcttggccagaatgccatgtac
ttgggagaactcaaggaaaagaatgaacaagcttttgaggaggtgtttcagaatgccaat
ttccgttcctacacctttagagttcgggtgaagttggaaacctacaatgatgaatctcgt
atcaaagccacagctatggatgtaaaaccagttgatcacaaagaatactcaaggcgcctt
atactgaacattcggaaactggctgctcagggagtctga
DBGET
integrated database retrieval system
