Rana temporaria (common frog): 120927640
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Entry
120927640 CDS
T07929
Symbol
PAFAH1B1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit beta
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00565
Ether lipid metabolism
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
120927640 (PAFAH1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120927640 (PAFAH1B1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120927640 (PAFAH1B1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120927640 (PAFAH1B1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120927640 (PAFAH1B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
LisH
Beta-prop_SPT8
Beta-prop_IFT140_1st
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
DUF2570
Motif
Other DBs
NCBI-GeneID:
120927640
NCBI-ProteinID:
XP_040194380
LinkDB
All DBs
Position
2:444139684..444258225
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFRKEAELDMNEEMDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVTSSEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKMLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVHTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYTTILDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGILFHPGGKFILSCADDK
TLRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggttctgtcacagaggcaacgagatgagctaaatcgagcaatagcagattatcttcgt
tccaatggctacgaagaagcttactctgtttttagaaaggaagcagagttggacatgaat
gaagaaatggataaaaagtatgctggcctactggaaaagaaatggacatcagttatcaga
ttacagaagaaggttatggaattagaatcaaaactgaatgaagcaaaagaagagtttact
tctgggggacctataggacagaagagggaccccaaagaatggataccacgtcctcccgaa
aaatatgcacttagtggtcacaggagtccggtcactcgtgtaattttccatccagtcttt
agtgttatggtgacctcttcagaggatgcaactattaaggtgtgggactatgagacggga
gattttgagcgaacactcaagggacacacagactctgtgcaggatatctcatttgatcac
tctggcaagatgctggcttcctgctccgctgacatgaccataaagctatgggattttcaa
ggatttgagtgcattaggaccatgcatggtcatgatcacaatgtttcttcagtagctata
atgcctaatggagatcatatagtgtcagcctcaagggataaaaccattaagatgtgggag
gttcatactgggtattgtgtgaagacgttcacaggacacagagaatgggtgcgaatggtg
aggccaaatcaagatggtaccctaatcgcaagttgttctaatgatcagacagtccgtgtt
tgggtggtagcaacaaaagaatgcaaagcagagcttagagaacatgagcacgttgtagag
tgtatttcctgggcccccgaaagctcttatactactatattggatgcaacaggatcagag
actaagaagagtggtaagcctggaccatttttgctctccggttccagagataagactatt
aagatgtgggatatcagtactggcatgtgcctaatgacacttgttggccatgataactgg
gtacgtggcatcctgtttcatccaggtgggaagtttatattgagctgtgctgatgataaa
accctacgtatttgggactataagaacaagcgctgcatgaaaaccttgaatgcgcatgaa
cactttgttacctctttggatttccacaagactgcaccttacgtggtcactggaagcgta
gatcaaacagtaaaagtgtgggagtgccgttga
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