Rana temporaria (common frog): 120927741
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Entry
120927741 CDS
T07929
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120927741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120927741
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120927741
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
120927741
NCBI-ProteinID:
XP_040194562
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Position
2:462008376..462120850
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AA seq
778 aa
AA seq
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MSQSDSDNSDTPKRRFELEVEDNDTKAAFSKGEKDGKRDKKPPMESSMQGEGNNFPLEIH
FDTSFLPSLPASKVKAPVIDPKDVYTRDRIFEAVVNHDTEDLAALKTYLHKSMKHLTNAE
FKDPDTGKTCLIKAMWNLQNGMNDTIPILLEADETPGKMEALVNAAYTNEYYKGQTALHI
AIEKRSFQLVQLLMKHKADVHAKAEGAFFQKKKKGVSFYFGELPLSLAACTNQPNIVDYL
LNNPYRKADLKARDSHGNTVLHALVLVADNTEKNTKIITKMYDDILKRSITIDPEMYLEE
TPNWEGLTPLKLAAKTGKIELFKHMLRREITEPEYKHLSRKFTEWTYGPVHTSLYDMSSV
DSYEADSVLETIVFNSSANNRHDMIVLEPINHLMQEKWDSYAGMIFCVKFFLYVLYMIIF
TVTAYHRPLEGQPPFPLEGTPKDNVRVLGEIIIMFGGLYILICQIIYFVKRRPSLQILIM
DGYFEILFFLQAAIILSSGIFYLAGSEVYVALIVFALVIGWVNMLYYTRGFQQTGIYSVM
IQKTILRDVLRFLLVYLVFLFGFAAALVTLIGEAPQKAENSTDDGKSEAGTSYSGLYIAT
LELFKFTIGMGDLEFNENLKFKHFFMFLLILYVVLTYVLLLNMLIALMSETVNKVSNESK
SVWKLQRAATILDIERFLPKRIKEKFRSGRLLTVGSKPDGKPDKRWCFRVEEIQWESFGE
NMSCINEEEPGDKENAHKLYKRPKGWSHWVSRAQEKAKEEELEPLKSVSTSPSNDEKV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcagattctgataactcagatacaccaaagaggaggtttgaattagaggtt
gaagacaatgacacgaaagccgcctttagtaaaggagaaaaagatggaaaaagagacaag
aagccacccatggaatcatccatgcagggcgaaggcaacaatttcccacttgaaattcat
tttgacacaagtttccttccatcactaccagcctccaaagtcaaggcccccgtcattgat
cctaaagatgtttacacaagagacagaatctttgaagccgttgtcaatcatgacacagag
gaccttgctgcactaaaaacctatttgcacaaatctatgaaacatctcaccaatgcagaa
tttaaagatcctgacacggggaagacatgtttaataaaggccatgtggaatcttcagaat
ggaatgaatgataccattcctatattgctggaagctgatgagacacctggtaaaatggaa
gcattggttaacgcagcatatactaatgaatattataaaggacagacagcactccacata
gctattgagaagagaagcttccaactagtccagctgctgatgaaacacaaagctgacgtc
catgccaaagcggagggcgcattttttcagaagaagaaaaaaggagtcagtttttacttt
ggtgaactccctctttctctagctgcctgcactaaccagcccaatattgtggactatctc
ttaaacaatccctatcgtaaggctgatttaaaagccagagatagtcatgggaatacagtc
ctgcatgctctggttttagtagctgataacacagagaagaacactaagataatcactaaa
atgtatgatgacattctgaagagatccataacaatcgatccagagatgtacctggaggaa
actcctaactgggaaggtctaacaccactgaagctagcagccaaaactggtaaaattgag
ttgttcaagcacatgctgcggagggagatcacagagccagagtataaacatctgtctcgg
aagttcacggaatggacgtacggcccagtgcacacctctctgtatgacatgtcatctgtg
gactcctatgaagctgactctgtgctggaaaccattgtattcaacagtagtgccaataat
cggcatgacatgatagtgctggagcccatcaaccatttgatgcaggaaaaatgggattct
tatgccggcatgatattctgtgtgaagtttttcctctatgttttgtacatgatcatattc
acagtgacagcgtatcacagaccacttgaaggacagcccccatttcctctggaagggaca
cccaaagacaacgttcgtgtacttggagaaatcatcatcatgtttggtgggctttatata
ctaatatgtcagattatatactttgtgaagaggcgtccttctttacaaattttaataatg
gatggctatttcgaaattcttttctttctccaagccgctattattttgagcagtggcatt
ttttacctggcaggaagtgaagtttatgttgcccttatagtgtttgcattggttattggc
tgggtgaatatgctgtattatacccgtggattccagcagacaggaatttacagtgtcatg
attcagaagaccatcctgcgtgacgtgcttcgtttcctcttggtctacctagtctttctc
ttcggttttgcagcagctttggttacacttattggtgaagctcctcagaaggctgagaat
agcactgatgatggaaaaagtgaagcaggaacctcatattcaggtctttacatcgctacc
ttggagctcttcaaatttactattggcatgggagacctggagttcaatgaaaacctgaag
ttcaagcactttttcatgtttctgctgatcttgtacgtggtactcacctatgttcttctc
ctgaatatgctcattgctttaatgagtgaaacggtaaataaagtctctaatgaaagcaag
agcgtatggaaattacagagagccgcaacaatcctggatattgagaggttcctgcctaag
cgcattaaggaaaagtttaggtctggccggttgcttacagtggggtcaaagcctgatgga
aagccagataaaagatggtgctttagggtggaagaaatacagtgggaatcatttggagag
aatatgtcctgcattaatgaggaggagcctggtgacaaagaaaatgcacacaagctttat
aaacgaccaaaaggatggagtcattgggtctcccgagctcaagaaaaggcaaaggaagaa
gagttagagcctctaaagtccgtgtccacaagcccatcaaatgatgaaaaagtctga
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