Rana temporaria (common frog): 120927743
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Entry
120927743 CDS
T07929
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03320
PPAR signaling pathway
rtem04120
Ubiquitin mediated proteolysis
rtem04137
Mitophagy - animal
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120927743
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120927743
04137 Mitophagy - animal
120927743
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120927743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120927743
Ubiquitin system [BR:
rtem04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120927743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Ubiquitin_5
DUF2604
Motif
Other DBs
NCBI-GeneID:
120927743
NCBI-ProteinID:
XP_040194565
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All DBs
Position
2:462308674..462312197
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AA seq
690 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDSIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDSIENVKCKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDSIENVKC
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVECSDSIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVECSDSIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDSIENVKCKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVECSDSIE
NVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVECSDSIENVKCKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVECSDSIENVKCKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGTHNLLS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctcacaggcaagaccatcacccttgaggttgaacccagt
gacagtattgaaaatgtgaaatgcaaaatccaagataaggaaggcatcccaccagaccag
cagagattgatctttgctgggaagcaattggaagatggtcgcaccctttctgactacaac
atccaaaaagaatccacccttcaccttgtgctccgtctgagaggtggtatgcagatcttt
gtgaaaaccctcacaggcaagaccatcacccttgaggttgagtgcagtgacagtattgaa
aatgtgaaatgtaaaatccaagacaaagaaggtatcccaccagaccagcagagattgatc
tttgccggcaaacagttggaagatggccgcacccttgctgactacaacatccaaaaagaa
tccacccttcaccttgtgctccgtctgagaggtggtatgcagatctttgtgaaaaccctc
acaggcaagaccatcacccttgaggttgagtgcagtgacagtattgaaaatgtgaaatgt
aaaatccaagacaaagaaggtatcccaccagaccagcagagattgatctttgccggcaaa
cagttggaagatggccgcacacttgctgactacaacatccaaaaagaatccacccttcac
cttgtgctccgtctgagaggtggtatgcagatctttgtgaaaaccctcacaggcaagacc
atcacccttgaggttgagtgcagtgacagcattgaaaatgtgaaatgtaaaatccaagac
aaagaaggtatcccaccagaccagcagagattgatctttgccggcaaacagttggaagat
ggccgcacacttgctgactacaacatccaaaaagaatccacccttcaccttgtgctccgt
ctgagaggtggtatgcagatctttgtgaaaaccctcacaggcaagaccatcactcttgag
gttgagtgcagtgacagtattgaaaatgtgaaatgtaaaatccaagacaaagaaggtatc
ccaccagaccagcagagattgatctttgccggcaaacagttggaagatggccgcacactt
gctgactacaacatccaaaaagaatccacccttcaccttgtgctccgtctgagaggtggt
atgcagatctttgtgaaaaccctcacaggcaagaccatcacccttgaggttgagtgcagt
gacagtattgaaaatgtgaaatgtaaaatccaagacaaagaaggtatcccaccagaccag
cagagattgatctttgccggcaagcagttggaagatggccgcacccttgctgactacaac
atccaaaaagaatccactcttcaccttgtgctccgtctgagaggtggtatgcaaatcttt
gtgaaaaccctcacaggcaagaccatcacccttgaggttgagtgcagtgacagtattgaa
aatgtgaaatgtaaaatccaagacaaagaaggtatcccaccagaccagcagagattgatc
tttgccggcaagcagttggaagatggccgcacccttgctgactacaacatccaaaaagaa
tccactcttcaccttgtgctccgtctgagaggtggtatgcagatctttgtgaaaaccctc
acaggcaagaccatcacccttgaggttgagtgcagtgacagtattgaaaatgtgaaatgt
aaaatccaagacaaagaaggtatcccaccagaccagcagagattgatctttgccggcaag
cagttggaagatggccgcacccttgctgactacaacatccaaaaagaatccactcttcac
cttgtgctccgtctgagaggtggtatgcaaatctttgtgaaaaccctcacaggcaagacc
atcacccttgaggttgagtgcagtgacagtattgaaaatgtgaaatgtaaaatccaagac
aaagaaggtatcccaccagaccagcagagattgatctttgctgggaagcaattggaagat
ggccgcacccttgctgactacaatatccaaaaagaatccacccttcaccttgtgctccgt
ctaagaggtggcacacacaatttattaagttag
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