Rana temporaria (common frog): 120927897
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Entry
120927897 CDS
T07929
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00562
Inositol phosphate metabolism
rtem01100
Metabolic pathways
rtem04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120927897 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
120927897 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120927897 (SYNJ1)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
120927897 (SYNJ1)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
120927897 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
120927897
NCBI-ProteinID:
XP_040194811
LinkDB
All DBs
Position
2:complement(502899758..503098360)
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AA seq
1548 aa
AA seq
DB search
MAFSKGFRIFHKLDPPFSLMVEARYKEECLMFESGAVAVLSSAEKEAIKSRYTKVMDAYG
LLGVLRLNLGETMSYYLVVVTGCMSVGKIQDSEVFRVTSTEFISLRIDPADEDRMSEVRK
VLNSGSFYFAWSATGVSLDLSLNAHRSTQDQRTDNRFFWNQALHLHLKHYGVNCDDWLLR
LMCGGVEIRTIYAAHKQAKACIISRLSCERAGTRFNVRGTNDNGQVANFVETEQVIYLDD
CVSSFIQIRGSIPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKRLYGSQVVVNL
LGSKEGETMLSKAFQSHLKASEHVSDVLMVNFDYHQMVRGGKAEKLNTVLKPKVSAFLED
CGFFSMDKDGVQRTQSGSIRTNCLDCLDRTNSVQAFFGLEMLLKQLEVFGLAEKPQMVTR
FQEVFRTMWSTNGDSISKIYAGTGALEGKAKTGKLKDGARSVTRTIQSNFFDGSKQEAID
VLLLGNTLNSDLADKARALLTTGSLHVSELMLQSASPRVLRSMCENYYRYAKPKKIRICI
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKIAGIQEFQDRRSKPTDIFAIGFEEMVELNA
GNIVNASTTNQKLWAAELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTTTLCFVCSHFAAGQSQVKERNEDYNEIVRKLSFPMGR
MLFSHDYVFWCGDFNYRIDFPNEEVKELIRSQNWDSLVPGDQLIKQKDSGQVFRSFLEGK
VNFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNSSLQEGRNF
PYTWNPGTLLHYGRAELKTSDHRPVVAVVDVDIFETEAEERQKIYKEVIATQGPPDGTIM
VSIQSKSSEDNYFDDNLIDELLQQFAGYGEVILIRFVDDKMWVTFLDGSSSLSALDLNGV
EVLGKTMNIQLKNPDWITQVEEEMNLEKISVTIPCSTSSTLLGEDAEIEPDYDMEGDVDD
YSAEVEEILPQHLQPSSCSNLGSSPSSSPRSSPCPSPTMPEGPPPALPVRPSRALGKTPG
PPVAASQGSPVDFQPIVQQKEQLSTLEPKRPPPPRPGVPPARPAPPQRPPPPSGARSPAP
TRKEIGGAPPSPGVARRDVEARGQAPPPLGPPSATPCAMVRPTIPPRAGVISVPQSHGGP
AQARLPAPAPVKAAEPPKAFPSLPEPMIPQLAAPLQPSLTTQPPCQKMQEPMQPTSSDPT
SHTPPPQSLDTPPQAPPRSRSAQNLPSDNVAPQPNPTNGVSGFRSQFENDLFADFSLDPL
PINKLPVLNTISSAPSASQREPVLLPSAVQNNLHTVNSLPILPPVPSRSVSQDSLRISPN
PFLNKSITTNSLNPINERSANAGNPFKNPTSLTGPTLLPTGVCEQFHSTSQPELQQSKPV
FTLGPAEKSLSLPHNFASVAESNLKSWVTFDDDSFTDISNRSVSNGIDFDGFQQSTFDSN
LNTIPVGSFSQSLRKPPPPPPIPSRTTKFDPSTKISTHPYPTMEFTDR
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagtaaaggatttcggatcttccataaactggatcccccgttcagcctgatg
gtagaggcgcggtacaaggaggagtgtctaatgtttgagtccggagccgtggcggtcctc
tcctcggcagaaaaagaagccattaagagcagatatacaaaagtcatggatgcctatggc
ctgttgggagttctgcgacttaatcttggggagactatgtcgtattatctggtggtggtc
accggctgtatgtcagtaggaaagattcaggactctgaagtctttcgtgtcacctccacg
gagttcatctccctaaggatcgaccccgcggatgaagatcggatgtctgaggtccgcaag
gtgctgaactccggcagtttctactttgcctggtctgcgacgggtgtcagtctggacctc
agcctcaatgcccaccgcagcacacaggaccagaggacagacaaccgatttttctggaat
caggctctgcacttacacctgaagcattatggagtgaactgtgacgactggctcctgcgt
cttatgtgtggcggagtggagatcaggactatttatgcggcacataagcaggccaaggct
tgtattatttcccgcctgagctgtgagcgcgcagggacaaggttcaacgtgcggggcacc
aatgataacggccaggtggccaactttgtggaaacggaacaggtgatttacctggatgac
tgcgtgtcctcgtttatacaaatcagaggctccattccccttttctgggagcagccaggc
ttacaggttggatctcatcgtgtgaggatgtcaagaggatttgaagccaatgctcctgct
tttgacaggcatttccaaactctgaagagactttatggcagtcaagttgtggtcaatctt
cttgggtcaaaagaaggcgagactatgctcagcaaagcttttcagagtcacttaaaggcg
tcggaacacgtgtctgatgtcctgatggtgaatttcgactatcatcagatggtgcgtgga
ggaaaagctgaaaagctgaacactgtcctcaaacctaaagtttctgcatttttggaagat
tgcggcttcttctctatggacaaagatggagtgcaaaggacacaaagtggcagcattaga
actaattgcttggactgcctggacagaaccaacagtgtccaagccttctttgggttggag
atgctattaaagcagctggaagtctttggcctggctgagaagccacagatggttacgcgg
tttcaggaggtattccgtacaatgtggtctaccaatggagactcgatcagtaaaatttac
gccggtactggagccctggaaggaaaagcgaagactggaaagttaaaagacggagcgcgc
tcggtaaccagaacgatccagagcaacttttttgatggctccaagcaagaagcgatagat
gtgctgctgctgggaaacaccttgaacagcgatttggctgacaaagcccgagctctcctg
actactggaagtttacatgtgtcagaactcatgttacaatcagcatcgccaagagtactg
cgaagcatgtgtgagaactactacaggtatgctaagcccaagaaaatccgcatttgcatt
ggtacctggaacgtgaatggcggaaagcagttcagaagcattgctttcaaaaatcagact
ctgaccgactggctactcgatgctccaaaaattgctggaattcaggagttccaagataga
agaagcaagcccacagatatatttgccatcggctttgaggagatggttgaattgaatgca
ggaaatattgtcaatgcaagcacaaccaaccagaagctgtgggctgcagaacttcagaag
accatatcccgggacaataagtatgttctgctggcatcggaacaattggtcggtgtatgt
cttttcgtcttcataagaccccagcatgccccttttatcagggatgttgcagtggacaca
gtgaagaccggaatgggaggagccacaggaaacaaaggtgcagtcgccatcaggatgctg
ttccacaccaccaccctctgcttcgtctgcagtcactttgctgctggacagtctcaggtc
aaagaaaggaatgaagattacaacgaaatagttcgcaagctaagctttccaatgggacga
atgcttttctctcacgactatgtcttctggtgtggtgacttcaattatcgcattgatttt
cccaatgaggaggtgaaggagctgatccgaagccagaactgggattcccttgtacctgga
gatcagctaataaaacaaaaagattctggacaagtttttcgaagtttcttagaggggaaa
gttaattttgctccaacctataaatatgacttattctctgatgattatgacacaagtgag
aagtgccgtaccccagcttggacagatcgtatcctctggagaagaaggaaatggcccttt
gacagatcagccgaagatttagatcttctgaattcaagcttacaagaaggcaggaatttc
ccttatacctggaatccaggtactttactgcactatggcagggcagagctaaagacatct
gatcacaggcctgtggtcgctgtggtcgatgtagatatatttgaaactgaagcagaagaa
agacagaagatctataaggaggtgattgccacccagggccctccagatggcacaattatg
gtctccatacaaagcaaatcctcagaagacaattattttgatgataatttgattgacgag
ctgctgcagcagtttgcaggttatggcgaggtcatacttataaggttcgtagatgataaa
atgtgggtgacgtttctagacggaagttcctccctctcggctttagacctgaatggtgtt
gaggttctaggaaaaacgatgaacattcagttgaagaacccggactggatcacacaggtg
gaggaggagatgaatctggagaagatcagtgtaacgataccgtgttccaccagttctacc
ttgttgggtgaagatgccgagattgagccagattatgacatggaaggtgacgtggatgat
tatagtgctgaagtagaggagattctccctcagcatctacagccatcttcatgctccaat
cttggctcatctcccagctcttctccccgctccagtccctgcccatcacccaccatgcca
gagggaccaccaccggctctccctgtccggccaagccgggcacttggaaaaacacccgga
cctcccgttgctgcatcccaaggctctccagtggacttccagccaatcgtacaacagaaa
gagcaactttccaccttagaaccaaagaggcctcctcctccgagacctggtgttccacca
gcacgcccagcaccccctcagcgccctcctccaccatcaggtgctcggagtccggcacca
actagaaaagagattggaggtgctcctcccagccccggtgtggctcgtagagacgtggaa
gctcgtggacaagcccctcctccgcttggacctccatctgccacgccatgtgctatggtc
aggccgactatccctccccgtgcgggggtaataagcgttcctcaaagccatggtggacca
gcacaagccagacttcccgccccagcacctgtcaaagcagctgagcctccaaaagcattc
ccatctcttcctgagcctatgataccccaactagcagcccctcttcagcctagtctaacc
acccaaccaccctgccaaaagatgcaagaacctatgcagccgacatcatcagatcccacc
tctcacacaccacctccgcagagcctagacacgcctccgcaggcacctccccgcagccgc
tccgctcagaatctgccttcagacaatgtcgctcctcaaccaaatccaactaatggagtc
agtggctttagaagtcagtttgaaaacgatctttttgcggacttctctttagatcccctt
cccattaacaagcttcctgtactcaacaccatatcatctgctccatcagcaagccaaagg
gagccagtcctgttgccttctgcagtacagaataatcttcataccgtcaatagcctgccc
atactgcctccagtcccaagccggagtgtatcgcaagacagtctgagaatatcccctaat
ccattccttaacaaatccattactacaaattcactcaacccaatcaatgaaagatcagca
aatgccggaaatccattcaagaacccaacatctttgactggtcctacattactgccaact
ggagtatgtgagcaatttcattccacaagccaacctgagcttcagcagagcaagccagta
ttcaccctagggccagcggagaaaagtctatcattgccccataattttgcctcagtggct
gagtctaatcttaaaagctgggtaacctttgatgacgacagttttacagatatatcaaat
aggtcagtcagcaatggcatagattttgatggcttccagcagtctacttttgatagcaac
ctgaacacaatcccagtaggttctttctctcaatcgctgaggaaacccccaccaccacct
cctattccatcaaggacaacaaaatttgacccctctaccaaaatatctactcacccttat
ccaactatggaattcactgatcggtaa
DBGET
integrated database retrieval system
