Rana temporaria (common frog): 120927898
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Entry
120927898 CDS
T07929
Symbol
PAXBP1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120927898 (PAXBP1)
Spliceosome [BR:
rtem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120927898 (PAXBP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
120927898
NCBI-ProteinID:
XP_040194820
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All DBs
Position
2:complement(503110271..503176183)
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AA seq
879 aa
AA seq
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MFRKVRRVNVRKRNDSEEEEREHEAPEHSEPPAAPPPPPLPPPSFPHTDGGGFQAAPRAR
EPKSKSKLLSFQDDEEEEEVFKIKKSNHSKKIVKLLKKEFKEDKEKTKPKSDVLLGLDGQ
PVRNLAIKDGGQEDMNIGSDLGEEEMEVESEKEEEKPKAGSFANSLSSSSSLNVLRPGEI
PDAAFIHAARKKRQLARELGDVPSLDVDGGKRLVREDENDASDDDDDDEKRRIVFSVREK
SQRQKIAEEIGIEGSDDEALATGEQDEEISRWEQEQIRKGISIPQVQAPQPAETNNLFYP
STYQGIPYGSAYNVPYTYSAFGSAETKPLKPDNSVSFKTPHNEMTPVTIDLVKNQLKDRL
RAMEDTHKANLEMYEKHEQSRQDSNKAISRLEGCSGDNAEQYQFLQEMRGYVQDLLECFR
EKVPLIIELETAMHQLFKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDTFGRDRA
SYQEHAKQRRIAEREARRARRRQAREVTGKMAEHLEGLSSDDEETSTDITNFNMEKDRIL
KDSSKVFEDALENFYSFDCIKEQFDNWRCKYENSYKDAFIGLCLPKLLSPLVRLQLLTWN
PLEPNCCDFESMMWFECLLFYGCDVKDADKEDADLALLPSLVEKVVLPKLTGIAESVWDP
FSATQTNRLAAVMQKLIHGYPTVVNSGNKSTEALLKGLLVRMRRTLDDDVFMPLYPKNVI
ENKNSGPCVFFQRQFWSSVKLLGNFLKWYGVLSNKCLQELAIDGLLNRYILMAFQNTESG
EDSIKKAQSVIACFPKQWFSNLKGGKTIPQLENFARYLTHLSGIIYRQNVGCSDVEKRNA
RDQIRQIVKLLAAIRALENAVSVANDYNIKDIKTSSDGK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcaaggttcggcgggtgaatgtgaggaagaggaatgactcggaggaagaggag
agggaacatgaggccccagagcacagcgagccgcccgccgcgcctcctcctccccccctt
ccaccccccagcttccctcacacagacggcggcggttttcaggcggccccccgggccaga
gaacccaaatctaaatctaaactactcagcttccaggatgacgaggaggaggaagaagtt
tttaaaataaagaaatcaaatcacagcaagaagatcgtaaaactccttaaaaaggaattt
aaagaagataaggagaaaacaaagcccaagtcagatgttctcctaggactggatggtcag
cctgtaagaaatttggctattaaagatggcggccaggaagatatgaacatcggtagtgac
cttggtgaggaagagatggaagtagaaagtgaaaaagaggaggagaaacccaaagccggt
tcttttgccaactccctgtcgtcgtcgtcatctttaaatgttctgcgcccaggagagatc
ccagatgcagcctttatccatgctgctcgcaagaagagacagctggctcgggagcttgga
gatgttccatctttggatgtggatggtggtaaaaggttggtgcgggaggatgagaacgat
gccagtgatgatgacgatgatgatgaaaagaggcggatcgttttctcagtacgagaaaaa
tcacaaaggcagaagatagctgaggaaattggaatcgagggaagtgatgatgaagctctg
gcaacaggggaacaagatgaagaaatcagtcgctgggaacaggaacagatacgaaaagga
attagtataccacaggtccaagcaccccaacctgccgagacaaataatttgttctaccca
agcacttaccagggaataccctatggttcagcctacaatgttccttacacctattctgct
tttggatctgctgaaacaaaacctctaaaaccagataattctgtctctttcaaaactccc
cataatgagatgactcctgttactattgatttggtaaagaaccagcttaaagacaggctc
agagcaatggaggatactcacaaagcaaatctggaaatgtatgagaagcatgagcaaagt
cggcaagactccaataaagcaattagccgattagaagggtgttctggggataatgcggaa
cagtatcagttcttacaagaaatgcgagggtatgtccaagacttgcttgagtgtttccgt
gaaaaggtgcctctgattatcgaacttgaaacggcaatgcaccagctgttcaaacagcga
gctgcccgccttgtccaaagacgacaagatgatattaaagatgaatcttcggagttttcg
agccattcaagtaaagctgtcatggcaccaaatctcgacacttttgggcgagatcgagca
tcttaccaagaacacgcaaagcagaggaggatagctgagagagaagcccgaagagcacga
cggaggcaagctcgggaagtaactggcaagatggccgaacaccttgaaggtctttctagt
gatgatgaagagacatccactgacatcactaacttcaacatggagaaggatcgcatttta
aaagattcaagtaaagtttttgaagatgcactggaaaatttttattcttttgactgtatt
aaagagcagtttgacaactggagatgtaaatatgagaattcctataaagatgcttttatt
ggactttgcttaccaaaacttttaagtcctcttgtacggctgcagcttttaacttggaac
cctttggagcccaattgttgtgactttgaaagcatgatgtggtttgagtgtttactcttc
tatggctgtgacgtgaaagacgcagacaaggaggatgcagaccttgctctattgccatcc
ttggtggaaaaagtagttctccccaagcttacaggtattgctgagagcgtgtgggacccc
ttctcagctacacagacgaatagactggctgccgtgatgcaaaagttaatacatggatat
cccacggttgtaaattctggcaataaaagcacagaggctctactaaaaggtttgttagta
agaatgagaagaacgttggacgatgatgtctttatgccgttgtatcctaaaaatgttata
gagaataagaattcggggccatgtgtgttctttcagcgccagttctggtcatctgtgaag
ctacttggtaacttcctgaagtggtacggcgttctttccaacaagtgtttacaggagctg
gcaatagacggcctgctgaacaggtacatattgatggcattccagaataccgagagtgga
gaagacagcatcaagaaagcccagagtgttattgcttgttttcctaagcagtggttttca
aacctcaaaggtggcaaaacaattccacagctggaaaactttgcccgctatcttacacat
ctctccggcatcatttacaggcagaatgtgggctgctcagatgtagagaaaagaaatgcc
agggaccagatccggcagatagtaaagctgcttgcagccatccgcgctctggaaaacgcg
gtgtcggtagcaaacgattacaacattaaagatatcaagacctcttcagatgggaaataa
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