Rana temporaria (common frog): 120927936
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Entry
120927936 CDS
T07929
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120927936 (CHAF1B)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120927936 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
CAF-1_p60_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
B-prop_COPA_B_2nd
Beta-prop_SPT8
NBCH_WD40
eIF2A
Ge1_WD40
Beta-prop_IP5PC_F
Beta-prop_EML
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
120927936
NCBI-ProteinID:
XP_040194887
LinkDB
All DBs
Position
2:508650573..508700857
Genome browser
AA seq
581 aa
AA seq
DB search
MKVKTCEISWHNREPVYSVDFQHGTSKVNRMASAGVDTAVRIWKVEKAKDGTGFVEFLAS
LVRHTKAVNVVRFSPNGEILASGGDDAVILLWKLSENQDVSMEITPFNEDDEAEMSKENW
TVYKHLRGHLEDVYDLSWTQDSNFMVSASVDNSAIMWDAVKGQKLSIFNEHKSYVQGVTW
DPLGQYIATLSCDRIMRVYRTETKRVAFNVSKMPSNSATDGENKTYRMFHDDSMKSFFRR
LTFTPDGSLLLAPAGCVEVGKVLVNTTFVFSRNHLKRPVSHLPCPSKVTLAVRCSPVYYE
LRPEVKGENGKAPPGLISQPYRMVFAVASEDSVLFYDTQQTFPFGYVSNVHYHTLSDISW
SNDGTFLVIASTDGYCSFVTFEEGEIGVPLKEKPALIIRTPSTAEKKVRKSQNRRFSSPI
LRAGEQTLSARLFEQSSPCTPIHSKIKAASTSQPSTPVGITSVPATPTSEDKKSGQNRKA
AQPRRITLNTLEAWSKSCKPSTPSPRRIALIPVKTNSPNTHQLAPVSPGPSRMECSSTDN
SPVQDPFCRPPEPKRLKTEVPPILIVDEEMPSCSKDYDEMS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaagacctgtgagatttcctggcataaccgtgagcccgtctatagcgttgat
ttccagcatgggacaagtaaagtgaatagaatggcatcagcaggagtggacactgcggtg
cggatatggaaggttgaaaaggcaaaagatggaacaggttttgtggagttcttggcaagc
cttgtgcggcacaccaaagctgtcaacgttgttcgtttctctcctaatggtgaaattttg
gcctccggtggagacgatgctgtaatattactatggaaactgagtgaaaaccaagatgta
agcatggaaataaccccattcaatgaagacgatgaggcagaaatgagcaaggagaactgg
actgtctacaaacatttgaggggtcatctagaggatgtgtatgacctctcctggacacaa
gacagcaacttcatggtctcggcatctgtggacaactccgctatcatgtgggatgctgtt
aaaggtcagaaattgtctatatttaatgaacacaaaagttatgtgcagggagtgacttgg
gatcccctgggccagtatatagcaacactgagctgtgatcgtattatgagagtgtacaga
acagagacaaagagagtggccttcaatgtaagcaagatgccatctaacagtgcaactgat
ggagagaataaaacgtatcgaatgttccatgatgacagcatgaagtccttctttagaagg
ctgacctttacacccgatggctctctcctccttgctccagctggctgtgttgaggttgga
aaggttctcgtcaacacaacatttgtcttctccaggaatcatctgaagaggcctgtatct
catctgccctgtccatcaaaagtcacacttgctgtgcgatgctcccctgtgtactatgag
ctgaggccagaagtgaaaggtgaaaatggtaaagcacctcctggcctgatctctcaaccc
tatcggatggtatttgcagtggcctctgaagattctgtactcttctacgacacccaacag
accttcccctttggttatgtttccaatgttcattatcatacactaagcgacatatcttgg
tcgaacgatgggaccttcctagttattgcctccacagatggatattgctcatttgtcact
tttgaggaaggtgagattggggtgccacttaaggagaagcctgctttaattataaggact
ccttccacagcggagaagaaggttaggaagtctcaaaatagaaggttttcctctccaatt
ctccgagcaggggagcagaccctttctgcaaggctatttgagcaatccagtccctgcacc
ccgatccacagcaagatcaaagcagcttccacaagtcagccatcaactccggtgggcata
actagtgttcctgccacgccgacctctgaggacaaaaagagtggacaaaacaggaaagct
gcacagcccaggaggattacactcaacactctggaggcttggagcaagtcctgcaaacct
agcacacccagcccacggagaatcgccctaatccctgtaaagacaaattcacccaacaca
catcagctcgctccagtgtccccaggacccagtaggatggagtgcagtagtactgacaat
tcaccagttcaggacccgttctgcagacctccagaacccaagcgtctgaaaacagaggtt
ccaccaattctcattgtagatgaggaaatgccaagctgtagcaaggattatgatgaaatg
tcataa
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