Rana temporaria (common frog): 120928020
Help
Entry
120928020 CDS
T07929
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120928020 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120928020 (POU2F1)
03021 Transcription machinery [BR:
rtem03021
]
120928020 (POU2F1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120928020 (POU2F1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120928020 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120928020
NCBI-ProteinID:
XP_040195015
LinkDB
All DBs
Position
2:complement(521562166..521781275)
Genome browser
AA seq
785 aa
AA seq
DB search
MFGRGTGISKPAEQNRTTSLLADARMNNPSESSKSTDSGDGNAGTQTNGLDFQKQAVPVG
TAITTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQTLNDGYQYYPVNPATVLKTKFKEEP
GEPPQPVQPSQQPSLQAAIPQTQLMVAGGQITGLTLTPAQQQMLLQQAQAQLLAAAVQHS
ASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPSSSL
PQAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPV
QHLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENITSDSALSSPNIMNSPGHGIEGLNRR
RKKRTSIETNIRVALEKSFLENPKPTSEEITMISDQLHMEKEVIRVWFCNRRQKEKRINP
PSSGLSASSPIKAMFSSPTSLVASTPSLVTSTAANTLTVNPVLPLTCAAAAVTSYSVPGT
TGTPTANTATVISTAPPVSSTLTSPSLSPSPSGSAAAPEASSASETSTTHTTSTPLTSPL
SSGQVMVTASGIHTAATALQGATQLPSNASLAAMAAAAGLNPGLMAPSQFTAGGALFSLN
PGTLGGALNPALMSNSTLATIQALASGGSLPITPLDASGNLVFANAGGTPNIVTAPLFLN
PQNLSLFTSSPISLVSAASAGAATPITSFHAATSSFDSIQNSLFTMASASGPASTTTTTS
GSKAQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaggggtaccgggatctcaaagccagcagaacagaacagaactacaagtctt
ttggcagatgcaagaatgaataatccgtcagaaagtagcaaatcaacagacagcggggat
ggaaacgcaggcacacaaacgaacggtctggactttcaaaagcaagcagtgcctgtcgga
acggctatcacgacagcccaagcacaggccttcctcggacacctccaccaggtccagctt
gctggaacaagtttacaggccgctgcacagtccttaaatgtacagacattaaatgatggc
taccaatactatccagtaaacccagcaactgttctaaagactaaatttaaagaagaacct
ggggagcctccgcagccagtccagccttcccagcagccctccctacaggcggccataccc
cagacacagctcatggtagccggaggacagatcactgggttaacactgacgccggctcag
caacagatgttgctacagcaggcacaggcacagttgctggccgctgcagtgcaacactcc
gcaagccagcaacacagcgcggctggagcaaccatctcggcctctgctgctactccgatg
acacagatccccctgtctcagccgatacagattgcacaggacctgcagcagttacagcaa
cttcagcagcaaaatcttaacctgcagcagtttgtattggtgcatccgtcaagcagcctg
ccgcaagcgcaattcatcatctcacagacgccgcaggggcaacaaggccttctgcaggca
cagaatctcttaacacagctacctcagcaaagccaagccaacctcctgcagtctcaacca
agcatcaccctcacctcacagccagcaacccccacgcgcacaatagctgcgacccctgta
caacatcttccacagagccagacgacaccaaagcgaatcgacactccaagcctggaagag
cccagcgacctggaggagctcgaacagtttgcaaagacgtttaaacagagacgcatcaaa
cttggtttcactcagggtgatgtggggcttgctatgggcaaactctatggaaatgacttt
agccaaactactatttcccgctttgaagccttgaacctcagctttaaaaatatgtgcaag
ttaaagcctctcttggaaaaatggcttaatgatgcagaaaacatcacatcagattctgct
ctctcgagcccgaacatcatgaactccccaggtcacgggatcgagggactaaaccgcagg
aggaaaaaacgcaccagcattgagaccaacatacgcgtggccttagagaagagttttctg
gagaacccaaagcctacctcggaggagattaccatgatttctgaccagctgcacatggag
aaagaggtcatccgtgtttggttctgcaaccgacgtcagaaggagaaaaggatcaaccct
cccagcagtggattatccgcttcttctcctattaaagcaatgttctcaagtccgacttct
ttggtggcctctacaccaagccttgtgacaagtactgcagcaaacaccttgactgtaaac
ccagtcctccctctaacctgtgctgcagcagcagtcaccagctactctgtcccaggcaca
acagggactcccactgccaacacggcaactgtgatatctactgcacctccagtatcgtct
accctgacatccccgtcactgagcccttccccgtccggctctgcagcagctcctgaagca
tctagtgctagcgaaaccagtacaacgcacaccacctccactccactcacttctccattg
agcagcggccaagtgatggtgacggcttcgggaatccacacagcggccacagcactacag
ggagcaacgcagctgccctccaacgcaagcctcgctgccatggccgctgcagcggggctg
aaccctgggctgatggcaccctcgcagtttaccgctggaggtgccttatttagtctaaac
ccagggactttggggggcgcactcaaccctgctctgatgagtaacagcaccctggcgaca
atacaagctctggcctctggtggatctcttccaataacgccactggatgcttctgggaac
ttggtgtttgccaacgcaggtggaactcctaacattgtgactgctcccttattcctcaac
cctcagaacctttccttgttcaccagcagcccaattagcctggtctctgccgcatccgca
ggggctgccacacccatcacaagctttcacgccgccacctcctcattcgactccatccag
aactctctctttacaatggcctctgccagcggaccagcttccaccaccaccaccacatcc
ggctccaaagcacagtga
DBGET
integrated database retrieval system
