Rana temporaria (common frog): 120928095
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Entry
120928095 CDS
T07929
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120928095 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120928095 (GTF2E1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
120928095 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
120928095 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
120928095
NCBI-ProteinID:
XP_040195132
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All DBs
Position
2:complement(536544036..536580078)
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AA seq
435 aa
AA seq
DB search
MANAGVVTEVPAVLKRLAKYVVRGFYGLEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVINTLKMDKFIKCRMRVETAFDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPNCCSTFTDLEANQLFEATSGKFLCTFCHTEVEEDESAMPKKDARTLVARF
NEQIKPLYDLLRQTEDINLAYEILEPEPTEIPSLRQSKERAAAAAAAAAGPQRETWSKGT
SYGDMYTQDVVISMEEQENPQKLAGENKPAKERPIWLRESTVQGGAYAETANIKDGLDPE
GFLDHGEGRPGADDNEEVMQALLKHEKKAAAAALGASAAPAASVGAGSDSDSDTSESDQD
SPAPRHPVASLRFQQDEDDEDEFEEVQAVPKVTVGGRSYLYSEVSQRPELVAQMTPQEKE
AYIAMGQKMFEDMYE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgccggagttgtgacggaagtccccgcggtgctgaagcgcctggctaagtac
gtggtgcgcggcttctacgggctggagcacgcgctggccctggacatcctcatccggaac
ccctgcgtgaaagaggaggacatgctggagctcctgaaattcgaccgcaaacagctccgc
gccgtcattaacaccctgaagatggacaagttcatcaaatgccgcatgcgggtggagacc
gccttcgacggcaagaccacgaggcacaactactacttcatcaactacagactgctggtc
aacgtggtgaagtacaagctggaccacatgaggcggaggatcgagaccgacgagcgggac
tccaccaaccgggcgtccttcaaatgccccaactgctgcagcacgttcaccgacctggag
gccaatcagctgtttgaggcaacatcagggaagtttctttgcactttctgtcacacggag
gtggaagaagacgagtcggcgatgccgaagaaggacgcccggactctggtcgctcggttc
aatgaacagataaagcctttatacgacctgctgagacaaaccgaagacatcaacctggcc
tatgaaatcctggagccggaacctacggagatcccgtctctccggcagagcaaagagcgc
gcagcggctgcagcagccgcggccgccggaccccagagggagacctggtccaagggcact
tcgtacggggatatgtatacgcaggatgtggtcatcagcatggaggagcaggagaacccg
cagaagttggccggcgagaacaaaccggccaaagagaggcccatctggctgagggagagc
actgtacagggcggagcctacgccgaaaccgccaacatcaaagatggcctggacccagaa
ggtttcctcgaccacggggagggccgtccaggggccgacgacaacgaagaggtcatgcag
gcgctgctgaaacacgaaaagaaggcggcggcggccgccctcggagcatccgcagctccg
gcagccagcgtgggcgccggcagcgactccgacagcgacaccagcgagtccgaccaagac
agcccggctccccgccaccccgtggcttccctccgcttccagcaggacgaggacgacgaa
gacgagttcgaagaagtgcaggcggttcccaaggtcaccgtcggggggcggagctacctt
tacagcgaggtgagtcagcggcccgaactggtggcgcagatgacccctcaggagaaagaa
gcgtacatcgcgatggggcagaaaatgttcgaggacatgtatgagtga
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