Rana temporaria (common frog): 120928371
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Entry
120928371 CDS
T07929
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120928371 (DDX4)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120928371 (DDX4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120928371 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4408
Motif
Other DBs
NCBI-GeneID:
120928371
NCBI-ProteinID:
XP_040195403
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All DBs
Position
1:78127473..78395360
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AA seq
726 aa
AA seq
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MSEEDWENEIGNPPASVPNLSNSEPAFPASNQNYFSSFNRNESTERGFGNRKGGDRNQNF
ESSERGFGNRRGGDSNQNFESSERGFGNRRGRGRGGFGTFGKDSNGNQESEEFTNDENGT
GDDNRRRGGFQRRGGFDGGKRREFPRSGGFGSEDGNEQRAFSSNDGFNNENSGFGSGRRG
GRGGSRGGSFSGDDSGEFGGRGDRESDRGRGFGRGGFRGKNEDVGVESGKGQEGLDRSEQ
GPPRVTYVPPPPPENEADIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDTL
ARNVCKAGYVKLTPIQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILTHLMAKGVESSA
FQALKEPEAIIVAPTRELINQIYLDARKFAYGTCVRPVVIYGGTQTFHSLKQISEGCNIL
CATPGRLLDIIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLRSPGITSKEERQTLM
FSATFPSSIQSLARNILKPDYLFVVVGQVGGACSDVEQVVMEVEEYGKKDKLMEILQGIG
SQRTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFKTGQCPVIVATSV
AARGLDIENVSYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIARSLV
KVLSDAHQEVPAWLEEVAFSAHGMSAYNPRSKFASTDDRQRGESREDFSTSGFTPSVAQT
EEEDWG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaagattgggaaaatgaaattggtaacccgcctgcatctgttccgaacttg
agcaactcggagccagcgttcccggcgagtaatcagaactatttttcatctttcaatcga
aatgaatcaaccgaaagaggttttggcaacagaaaaggcggtgaccgcaatcaaaatttt
gaatcttctgaaagggggtttggaaaccgaagaggtggtgactccaatcaaaattttgaa
tcttcggaaagggggtttggaaaccgaagaggcagaggtcgaggtggatttggtacattc
ggcaaagattctaatggtaaccaagaaagtgaagaatttacgaatgacgaaaatgggaca
ggtgacgataatcgtaggcgtggtggttttcagcgaagaggtggatttgatggtggtaaa
cgaagagagtttccgagaagtggtggttttggtagcgaagatggaaatgaacagagagct
tttagtagtaatgatggttttaacaatgagaattctggttttggaagtggaaggaggggc
ggtagaggtggcagtagaggtggttcattttctggtgatgattctggagagtttggggga
aggggtgatcgagagtcggacaggggaagaggttttggaagaggtggctttagaggaaaa
aatgaagatgtaggggtggaatctggtaaaggtcaagagggattggaccgctcagaacaa
ggtccaccaagggtgacctatgttccacctcctccacctgaaaatgaagctgatattttt
aaacattaccagaccggcattaactttgacaaatatgatgacattgtggttgaggtctct
ggaagtgatgttccaccagcaatactgacctttgaagaagcaaatctttgtgacacgcta
gcaagaaatgtgtgcaaagctggatatgtgaaattgactcctatacagaaacacagtatt
cctattatcatggctggtcgtgatttaatggcttgtgcacagacgggatctggaaaaacg
gctgcttttcttttgccaattttgactcacttgatggctaaaggcgttgagtctagtgcg
tttcaagcattaaaagagccagaagcaattattgtcgctcctacaagagaactgattaat
cagatctatctagatgctcgtaaatttgcatatggaacatgtgtgcgcccagttgtgatt
tatggaggaactcagacgtttcactctttgaaacagatctctgaaggatgtaacattctt
tgtgcaacccctggaagattattggatatcatcaggaaagagaagattggtttaactaaa
ttgcgctaccttgtgttggatgaagctgaccgtatgttggacatgggttttagagaggac
attgaaaatttgttgcgaagtccaggaattactagtaaagaagaaagacaaaccctaatg
ttcagtgctacatttccctcaagcatacagagccttgccagaaatattctgaagccagat
tacttgtttgttgtggttggccaagttggtggtgcctgcagtgatgtggaacaggtggtc
atggaagttgaagaatacgggaagaaagacaaattgatggaaatcctacaagggataggt
agtcaacgcacaatggtgtttgtgaaaactaagaagaaagcagatttcattgctacattt
ctctgtcaagaaaaagtcccatcaaccagcattcatggtgaccgagaacaaaaggagaga
gagacagctctaagggactttaaaactggacaatgtcctgtaattgtagccacttctgtt
gctgccaggggactggatattgaaaatgttagttatgtcatcaattttgatatcccagat
gatatagatgaatatgttcacagaattggacgtactggacgctgtggcaatacaggaaga
gcaatctcattctttgataaaagaggtgatgacgaacaaaggattgctcgttcacttgtg
aaagttttatctgatgcacatcaagaagtgcctgcttggcttgaagaggttgccttcagt
gcccatgggatgtctgcttacaatccacggtcaaagtttgcatccacagatgacagacag
agaggagaatccagggaagatttcagcacttcaggatttaccccgtctgtggctcaaaca
gaagaggaggattggggataa
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