KEGG   Rana temporaria (common frog): 120928847
Entry
120928847         CDS       T07929                                 
Name
(RefSeq) putative short transient receptor potential channel 2-like protein
  KO
K10803  DNA-repair protein XRCC1
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120928847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120928847
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     120928847
SSDB
Motif
Pfam: XRCC1_N
Other DBs
NCBI-GeneID: 120928847
NCBI-ProteinID: XP_040195805
LinkDB
Position
2:complement(15986472..16016628)
AA seq 399 aa
MAPIRIQHVVSFSSQDPRHPVDNLLSDNIQPWLSCPRDRSRQLKVELQLERASHIAYIDV
GNSGSAFFQIDVGRSSGPVGQPFVPLLPTATLMSPADSKLEKNARGVRMFKEGDFLEETA
GEKWDRLRITCSQPFNKQAQFGLSFIRLRSALEEEDQNCAPETNTHQEYKSSLLSGMLPG
KLQKEEDTNNRDPREERIKERLQRVMSPPSPRTPCLSRTVRMVLSATQSRKRSYPVTSPS
SSPTPLQPGEGDGQHGESPVSSGSCPETSVTPSKPKYCGNSSNRGRQRTVRTRGRGRRPS
GNPQRKERGGQYPTQLPPPGTSCCPICAGYFPADALPVHASSCGEVYQPPSIVLSSSDDD
SLDGFQVIRDVPESWVTCPLCAFRFLSTEIEQHASMCGE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcaccaatcagaatccagcacgtcgtttccttcagctcccaggatcccaggcacccc
gtggacaatcttctgagtgacaacatccagccgtggctgagctgcccccgggaccgcagc
cgccagctgaaggttgagctgcagttggagcgagccagtcatattgcgtatattgacgtg
ggaaacagcggatcagccttcttccagattgacgttggccgctccagtgggcctgtaggt
caaccatttgtccctttgctacctacagccaccctaatgtccccagcagactctaaactg
gagaagaacgccagaggggtccggatgttcaaagaaggtgacttcttggaagagactgct
ggtgagaaatgggaccgactacgaatcacctgcagtcagcccttcaacaagcaggcacag
ttcggcctgtcttttatacgccttcgatctgcgctggaagaagaggatcagaactgcgct
ccggaaaccaatactcatcaggaatataagtcctctctcctctccggcatgcttccagga
aaacttcagaaagaagaggataccaacaatcgggatcctagagaggaacggataaaggag
aggctgcagcgggtcatgtccccaccttctccccgcaccccatgcctcagccgcacagtc
cgcatggtgctatcggcaacccagtcacgtaaacgcagctatcccgtcacatcgccatcg
agttctcccacccccctacagcctggagagggcgacggccaacatggagagagcccggtg
tcctctggttcttgtcctgagacgtctgtgacacccagcaaaccaaagtattgtggaaat
tcctccaacagaggcaggcagagaacagtacggacgcgcgggagagggaggagaccgtct
ggtaatccacagagaaaagaacgtggcggtcagtacccaacacagctccctcctcccggg
acaagctgctgtcctatctgtgcagggtactttcctgccgatgcccttcctgttcacgcc
tctagctgcggggaagtctatcagccgcccagtatcgtcttatcgtcttcagacgacgat
tccttggacggcttccaggtcattcgggatgttccagagtcctgggtcacatgcccgctg
tgtgcgttccgcttcctgagcactgagatagaacaacacgccagcatgtgtggggagtga

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