Rana temporaria (common frog): 120929079
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Entry
120929079 CDS
T07929
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120929079 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120929079 (SMARCD1)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120929079 (SMARCD1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120929079 (SMARCD1)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120929079 (SMARCD1)
PBAF complex
120929079 (SMARCD1)
GBAF(ncBAF) complex
120929079 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SusD_RagB
Motif
Other DBs
NCBI-GeneID:
120929079
NCBI-ProteinID:
XP_040196208
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All DBs
Position
2:64163784..64200842
Genome browser
AA seq
508 aa
AA seq
DB search
MAARAGFQSVTPGGSGPAPAVMGPGTPGPAVRMGPAPGQGMYRSPMPGAAYPRPGMLPGS
RMTPQGPAMGPPGYGGSPAARPGMAQSGMDQSRKRPAPQQIQQVQQQAAQNRNHSAKKKK
MADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFIS
NTFNPAKSDMEDGEGTVASWELRVEGRLLEDATLSKYDVSKQKRKFSSFFKSLVIELDKD
LYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGI
HTQTRPVIIQALWQYIKTHKLQDPHEREFIVCDKYLQQIFESQRMKFSELPQRLHALLMP
PEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTSSQQEIAALDNKIHET
IETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWA
QEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggctggcttccaatcggtgactcccgggggatccgggcctgcgcccgct
gtgatgggccccgggacacccggacctgctgtgaggatgggccccgccccggggcagggc
atgtaccggtcaccgatgccaggagccgcttacccgcgacccgggatgcttccaggcagt
cggatgactcctcagggaccagccatgggacctccaggttatggtggaagcccagctgct
cgaccagggatggctcagtcaggtatggaccagtcccggaaacgccctgcacctcagcaa
atacagcaagttcagcaacaggcagctcaaaataggaaccacagtgctaaaaagaagaag
atggctgataagattctacctcagaggattcgggagctagtacctgaatctcaggcttac
atggatttattggcttttgagaggaaattggaccagacaattatgagaaaacggcttgat
attcaagaggccttgaaaagaccgatcaagcaaaaaaggaaactccgcattttcatttct
aacacatttaacccggcaaagtctgatatggaggacggcgagggaacagtggcttcttgg
gagctgcgtgtagaaggtcgccttctggaggatgcaactttatccaaatatgatgtttcc
aaacagaagagaaaattctcatcattttttaagtctttggtcattgagttagacaaggat
ctgtatgggccagataatcatttggtggagtggcacagaacaccaaccactcaggagaca
gacgggtttcaggtcaaacgtccaggagacgtcaatgtacgctgcactgtgttgctgatg
cttgattatcagccacctcagtttaagcttgatccccggttggctcgtcttcttggaatc
cacacacagactcgtccagtcatcattcaagctctatggcagtacattaaaacacacaaa
cttcaggaccctcatgagcgggagttcatagtctgtgacaaatacctccagcagattttt
gaatctcagaggatgaagttttccgagcttcctcaaagactacatgcccttctcatgcct
ccagagcccatcataattaatcatgtcattagtgtggatcctaatgaccagaaaaagaca
gcatgttatgatattgatgttgaagtggatgacaccctcaagactcagatgaactctttc
ctgctttccacttccagtcaacaagagattgcagctctagataataagattcatgagacg
attgaaacaattaatcagctcaagattcagagggagttcatgttgagcttcgcccgtgac
cctcaaggttttattaatgactggctacagtctcagtgccgtgacctcaagactatgacg
gatgttgttggaaatccagaagaggagcgcagagcagaattctatttccagccctgggct
caggaagctgtctgtcgatacttctactccaaggtgcagcaaagacgccaggaattggaa
caagccctggggatcagaaatacataa
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