Rana temporaria (common frog): 120929114
Help
Entry
120929114 CDS
T07929
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120929114 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120929114 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120929114 (VPS36)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120929114 (VPS36)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120929114 (VPS36)
Exosomal proteins of colorectal cancer cells
120929114 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BBL5
G1_gp67_C
TPR_26
MA3
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
120929114
NCBI-ProteinID:
XP_040196277
LinkDB
All DBs
Position
2:69603205..69678966
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFSWSTGLLEIEETLVIQQRGVRLSDGEDKCKFDAGALLLTTHRLVWRDQKNHEFCIA
IPLSQIVFTEEQAGGIGKSAKIVVHLHPPSPNKEPGPYQTSRYSYVKLSFREHGQIEFNR
RLSEELTQRRWERTSPSPSIQMNKGPQAGRIKAVGIVGIERKLEEKRKETDKNISEAFVD
LSKLMEKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLATMLQNPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACRMFESLKLP
VRLRIFDSGVMVIEHQSHNEEEMVAAALETVSERGSLTSEEFAKIVGMSVLLAKERLLLA
ENMGHLCRDDSVEGLRFYPNLFLTQT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttctcgtggtccactgggctgctggagattgaggagacactggtgatccag
cagagaggggtgcgcctgtcagatggggaggataagtgcaagtttgacgccggcgcccta
cttctgacaactcatagacttgtatggagggaccagaaaaatcatgaattctgtattgca
attcctctttcccaaattgtgtttacagaagagcaggcaggaggcattggaaaaagtgcc
aaaattgttgtacatctccatccaccttctccaaacaaagaacctggaccgtaccaaact
agccgctactcttacgtcaagctttcatttagagaacacggtcaaattgagttcaatcga
cgactgtcagaggagttaacacagagaagatgggaaaggacatcaccctcgccctctatt
cagatgaacaaaggcccacaggctggaagaataaaagcggttgggattgttggcattgag
agaaagctggaagagaaaagaaaggagactgacaaaaacatttccgaggcctttgtggat
ctgagcaagctgatggaaaaggccaaggaaatggtagaactgtccaaatcgatagctaac
aaaatcaaagacaaacaaggggacatcacagaagatgagaccattcggtttaaatcctac
ctcttgagcatgggcattgccaatccagtgacccgggaaactcatggatcgggcactcat
taccacatgcaactggcaaagcagctggccacaatgttacaaaacccattagaggaacga
ggaggtataatgtctcttacagaagtatactgtctagttaacagagccaggggcatggag
ttgctgtctccagaggatctagtaaacgcctgcagaatgtttgaatctctgaagcttcct
gtccggctgcgtatttttgatagtggcgtcatggtaattgaacatcagtctcacaacgaa
gaggaaatggttgctgctgctttagaaacggtatctgaaaggggatcattaacctctgag
gaatttgccaaaatagtgggaatgtctgttctgctggccaaagaaagacttctgcttgca
gagaacatgggccacctctgccgggatgactctgtggaagggttgcgcttttacccaaac
ctatttctgacgcagacttaa
DBGET
integrated database retrieval system
