Rana temporaria (common frog): 120929115
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Entry
120929115 CDS
T07929
Symbol
THSD1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120929115 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120929115 (THSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
120929115
NCBI-ProteinID:
XP_040196278
LinkDB
All DBs
Position
2:69700404..69730401
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AA seq
846 aa
AA seq
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MRQSLCCSTYISLLVLWGCAFSNPGYLLLKQTHHIAFSKSSIQVEFHIAENSSISTNATV
TLLEMKNNQVVTNKELPANTSQGILEFECIHFTSAGLYQFQMSLERNNDSAIHITSSFLN
VTWPVFHVDLNRTSKDMQRSFQVGVFTNEQLCSGFSGQEPKISLEVEHTQSFQGLSEPNV
HQFMVYKTYKDVPLSTSQWVEFECASVHPEAFITVSLKPIDSESVIAYIGPIDLVKTFKY
KLTTMTEKKCDSSMTVHVIAPPCNYVEGKIIVYKESPRSPGEVVTTLAENTLQKGERNSQ
FNCTLFEIGKNKYCFEFLVSSSSSPNFSLPRAKQCVEIRREIETWSLWQPWSSCSTTCGD
GHRERYRTCLSSPSVKPSCSGTAKETSLCSLEDCSTVKPSSKSTTNAKDVPNTSNTVTIT
GISLCLFIIFVTVVITVWRKFGKGCKCRPTTRHSSAHSVNCWRNSDEENIYQMRESFSDA
GEGQPEGMEDGVHIPLNYRQNNCDTQEVAPTENDCTQVNNQKIIPPIFSYRLAQQQLKEM
KQKGLKETTKVYHVSQSPMADTALDISMAPPPVNDNLEEMATNKFRIQSPFLETKNSHCR
NAGERTYPKFSQAPGYSPNQTLPKASHLKNADTKAKYDRGYQKNNFRRTSSFHETKHKPY
RERSLTSLSPRQQMIYNSRTRMWENSTVDRSNKKPTGLERSPEYLTRGISLPLEAAGHLP
RNQYARPGEKPDLICNRHTTGRQSKMERPDQNRVRKGPSPVEKSWNRTKNVSPSPKDIHH
RKSPQSPVHFRREKCQSFPWGADYSFYDNSTFGLTEAEQQMLDLPGYFASNEEDETSTLS
IERLVI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatcactgtgctgttccacctacatatcgctgcttgttctatggggttgtgct
ttcagtaatcctggctatctcctgcttaaacaaacccaccacatagcctttagcaaatct
tctattcaagttgaatttcatatcgcagaaaattccagcatatctacaaatgctacggta
actttgctggaaatgaagaacaaccaggtagttacaaataaagaacttcctgcaaacaca
tcgcaaggtattttggaatttgagtgcatccatttcacatcggctggtctatatcagttt
cagatgagcctggagagaaataatgacagcgctattcacataaccagcagcttcttgaat
gtaacttggccagtgttccacgtggatctgaacagaacctcaaaagatatgcagagatcc
ttccaggtcggggtcttcacgaatgagcagctttgctcaggattttcgggtcaggagccc
aagatttcactagaagttgagcacactcagagcttccaagggctgtcagaaccaaacgtt
catcagttcatggtgtataaaacgtacaaggatgtccctttgtccacatcacaatgggta
gaatttgaatgtgcatctgttcacccagaagcctttatcacagtgtctctgaaaccaata
gattctgagtcggtcattgcctacattggacccattgatcttgtaaagacctttaaatat
aagctaaccaccatgacagaaaaaaaatgtgattcctcaatgaccgtccatgttatagca
cctccatgtaattatgttgagggcaaaattattgtatacaaggagtctcctagaagcccg
ggagaagttgtcaccacgttagcggaaaatactctgcaaaaaggggagcggaactctcag
ttcaactgtacgttgtttgagatcggcaaaaacaagtattgctttgagttcttggtgtct
tcaagcagcagtcccaacttctcacttccaagggccaaacagtgtgtggagattcggaga
gaaatagagacgtggagtctgtggcagccatggagttcctgtagtaccacctgtggggat
ggccacagagaacggtacagaacctgcctttcatcaccatctgtaaagccttcttgtagt
ggaacagcaaaagagacctctctctgttcgctagaagactgctcaactgtgaagccctca
agcaaatctaccacaaatgccaaggacgttccaaatacgagtaacacagtgactatcact
ggaatttctctctgtctcttcatcatttttgttactgtagtgattaccgtatggagaaaa
tttggcaaaggatgcaagtgccgcccaacaaccaggcatagctctgcccattcagtgaat
tgttggagaaactcagacgaggagaatatctaccaaatgagggaaagcttctctgatgca
ggggaaggtcagccagaagggatggaagatggagtccacatacctctaaattacagacaa
aacaactgtgacacccaagaggtggctccaactgaaaatgactgtactcaagtaaacaac
cagaagataattccaccgattttcagttatcgtcttgctcagcagcagctaaaagagatg
aaacaaaagggtctgaaagaaaccacaaaagtatatcacgtctctcagagcccaatggcc
gatacagctctagacatctctatggctccaccgccggtcaatgataatttagaggagatg
gcaacaaataagtttcggatacagtctccatttttagagacaaaaaatagccattgcaga
aatgctggtgaaaggacttacccaaagttttcacaggcacctggatacagccccaatcaa
acattgcccaaagcttcgcaccttaagaacgcagatactaaagcaaagtatgacagaggc
tatcaaaaaaataatttccgaagaacatctagttttcatgaaactaaacacaaaccctac
agggaaagaagtctaacatccctttctccaaggcaacaaatgatttacaactcaagaacc
cgtatgtgggagaattctacagtagacagatcaaataaaaagcccacaggactggaaaga
agtccagaataccttacacgaggcatctctcttcctttagaggcagctggacatttgccc
agaaatcaatatgctcgaccaggcgagaaacctgatttaatctgtaacaggcatactact
ggcaggcagtctaaaatggagcgaccagatcagaaccgagtacgcaaaggaccttcgcca
gttgagaagtcttggaacaggaccaaaaatgtctcaccttctccaaaagacatccaccac
aggaagagcccacaaagtcctgttcatttccgacgggaaaagtgtcagagttttccttgg
ggcgcggattattctttctatgacaactccacatttgggctcacagaggctgaacaacag
atgcttgacttacctggatattttgcttcgaatgaagaagatgagacaagtacattaagt
attgaaagactggtgatttga
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