Rana temporaria (common frog): 120929130
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Entry
120929130 CDS
T07929
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120929130 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rtem04091
]
120929130 (FREM2)
Lectins [BR:
rtem04091
]
C-Type lectins
Lecticans
120929130 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Cadherin_4
TMEM154
Orf78
RIFIN
EphA2_TM
DUF5385
Tmemb_9
CD34_antigen
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120929130
NCBI-ProteinID:
XP_040196307
LinkDB
All DBs
Position
2:complement(72115364..72364855)
Genome browser
AA seq
3117 aa
AA seq
DB search
MTSRVPAVRTRTALLPLLELLLLIATAESQRGAPDDSHLTYGPLEEEILVANHGIRVPFG
RSVYLDPVVDLVIQVQPGDKCHISVLSNDPLSQGPGHLSPNRFPCEFGAREVKYSHLGAR
SPSKDRVKLQLRYDTQTRTVIIPFMIEVEVLFTQLEVVTRNMPLTVEKLLGTSNPIDKKV
LEFSYDRTFEVCRITPLVGLGGLPRYGRLLQSPGHMMDCGEFLQQGVRYLHTASTQSPNK
DFIPMLVELHDKVGNLLKQEHFQVLVRVKEGLENTQPKPSFIAMMMMEVDQFVMTAITPD
MLAAEDLESDPGDLIFNVTSNFVPGQGQIVSTDDRNLPITSFYQRDLQELRIAYKPPPED
SDTERIFEVELEVVDSEGAVSEPFSFMIVVKPMNTMAPVVTRNTGQLLFEGQSRPLFSGQ
NLQISDEDNLDDVRVSVLDGLRHGQLYLLGSPPESSKFFTASDLDQGRVIYQHDGSDTYS
DNIIFRMTDAKHEVEFLFPITVVPTDDEPPIVNANTGLMLSEKEVAPVTPLVLSATDIDS
EDSTIRFILELPYSTLGQMVLRQSEIPQDPSEWQFIPNLKMYEKVVSEWTQQDILDGKLY
YKHIGPHSTVPVMDQHVFRVQDDNDPPNQSGEHTFVVKINPIDDLPPELYPGTTLKMVVQ
EYHLTYFRKKFLRYTDLDSDDRDLKYTVTIPPSDTDENNPAIMGFIVLSENPDLVVTEFT
QAQINHHKISYKPPDLELGITPRVLQFHYTVEDMSGNLAEGDFTIFLQPVDNKPPNIINT
GFTVFERGSHDITEAELDATDADTGRDKITFTLTQSPRHGQVLYSNQVMDVGESFVLDDI
RNGKISYMHSGEESASDSFTLDVSDGVHVLTIIIKITVRLVDDEVPRIMLPTGTIGSYLD
VLEGGSAEITSNVIQGTDADTDDLMLTFIVEDPPRLGEILVNGLPSERFSQRDIIDGAVI
YSHSAGEIGLQKMEDSFNLTLSDLSEEWTVGGNRVTGVRVQVTILPIDNQAPLVTVGEQF
TVIEGEKNVITSSNLRAQDTDTPNDDILCTIVVQPTSGYLENISPAPGSEKSRAGTAISA
FTLKDIRIGHIYYVQSIHKGVEPVEDRLTFHCSDGINFSQKHFFPIVIIPANDEKPEIFM
REFVVMEGMSLVIDIPILNGADADIPTDELVFFITKPPKHGNIVNQFTNGTVIVNSFNLE
DIKESSTILYEHDDSETKEDSFDIKLTDGKHSVVKTVLIMIIPVDDETPRMTINDGLEIE
IEETKLITNKVLKATDLDSDDKTLTFILRYGPGQGLLQRRKPNGGLENITIGMNFTQDEV
DRELIQYQHFGQEGIRDLFKFDVTDGINPLIDRYFYVTVGGIDMVFPDVVNKGVSLKEGG
KVTLTTNLLSTSDLNSPDEHLVFTITRAPVRGHLECTDFPGVPITSFTQLQLAGNKVYYT
HTSDDEVKMDSFEFEVTDGYNPVFRTFRISISDVDNKKPVLTIHEVTVRESENKLITPFE
LTVEDRDTPDKRLRFVITQVPVHGKILYNNSRTVTSFTKQDLNDNLISYKHDGTETTEDS
FSFTVTDGTHTDFYVFPDTVYETRQPQMMKIRIIAVDNGVPQIIVNKGAPTLRILSTGHL
GFLITNKVLKAEDRDSVHLSLRIRVTQGPSHGFLINTDKGNHSINQFSQADIDDMKICYV
LRDKENATSDIFYFTVEDSGGNKLKNQHFRLNWAWISIEKEYYVVNEDAKHLEIILRRRG
YLGETSFVGIGTVDGTAEKDKDFRGKAQKQVQFNPGQTTATWRVRILTDGEYEQSETFQI
ALSEPVMGALEFPEVTTVEIIDPGDESTVFIPQSIYKIEEDVGELFIPVKRSGDVSQELM
VICFTHQGTATGTVPTSVLSYSDYISRPEEHTSVLRFDKGEEEKTCRVVIIDDSLYEEAE
TFNVTLSMPMGGRLGTEFPSAQIMILPDKDDEPAFYFGDVELYVDESAGYIEVRVWRTGT
DLSKTATVTVRSQKTEPVSAVAGIDYVGISRNLDFAPGVNMQTFRVVILDDLGQPVLEGI
EKFELVLRMPMNAVLGEPSKATVFINDTVSDLPKVQFREPMYMGKEKDGKITAMVYRSGD
VSYKSTVRCYTRQGSAQVMMDFEERPNTDSSIITFLPGETERPCTVVLVDDSIHEEEEEL
RLVLGTPKSDSPFGASIGELNETLIKIKDDADKAIIKFGDTKFSVSEPKEPGQIVVVKIP
VVRLGDTSKVSIVRVHTKDGSATSGEDYNPVSEEIEFKEGETQHIVEIEVLYDGVREMRE
AFTIHLKPDENMVAEIQMAKAIVYIEEMNSMADVTFPSVPQVVSLFIYDDTSRAKDNPNP
VSGYPVACITACNPKYSDYDKTGSICTSENINDTLTRYRWLVSAPKGLDGVTSPMREVDF
DTFFTSSKMITLDSIYFHAGSRVQCAARAVNSEGHEGLELLSTIVTISTDDGLCQPRVAG
AVGAEPFSAKMRYTGPEDPDHPNLIKVTVTLPHIDGMLPVVSTREMSNFELTLSPDGTRV
GNHKCSNLLDFNEVRTNYGFLTDATKNPNVIGETSPYQYSTQLRGSNTLRFYRNLNLEAC
LWEFSSYYDMSELLTECGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFD
LHSELRLTFVYDTAILWKDGIGSPPEAELQGSLYPTSMRINEEGRLVVNFKTEARFNGLF
LMSHPGSSLSSMVMSADHPELIFTLGLVRSEPTFNQPVQQWSFVSEFAVRDYSGTYTVKL
IPCTTAPYQVYSLPAVCNPREPITFDVDIRFQQVSDPVAAEFNLNTQLILLSKKSLWLSD
GSMGFGQESDIAFTEGDIIYGRVMVDPVQNLGNSFYCNIEKVFLCTGADGYVPKYNPSNG
EYGCLADSTSLLYQIKILDKAQPETQTTRFGSVVFNARLAADDPEALPLVRQPGSDGFKI
DSTPLFQVSTGREWYIHTIYTVRSKENANRGIGKRSVDYQYHSVLNSGPSGGSAARKKRD
VSEAPTIAQDIGMDNNRGTNIQHIILDSSNKKTAPEKEITVDGIIPRELNKNESEVNVVI
IVVILAAILLLVVCLIAIVVFLLRRKQKSKKKEEGQETGSSEPMMPHRGYSTDSSEV
NT seq
9354 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccgggtccctgctgtcaggacacgtactgcgctactaccactgctggagcta
ttgctgctgatcgccaccgcggagagccagcggggggccccggacgactctcacttgact
tatgggcccctggaagaggagatcctggtggccaaccatgggatccgggtgcccttcggg
agatctgtatacctggacccggttgtagatctagtgatccaagtccagcctggagacaaa
tgtcacatcagcgtgctgagcaatgaccccctatcccagggaccgggccacctctccccc
aacaggttcccctgtgagttcggggccagagaagtgaaatattcccacctgggggcccgg
agcccctccaaggacagggtgaagctgcagctccgctatgacacccagaccaggacagtc
atcatcccattcatgatcgaggtggaggttctcttcacccagctggaggtggtcaccagg
aacatgccacttaccgtagagaagctcctggggaccagcaaccccatagacaagaaggtc
cttgagttctcctatgataggacgtttgaggtgtgcaggatcacacctctggtgggtcta
ggaggacttcccaggtatggaaggttgctgcaaagtcctggccacatgatggactgtggg
gaattcctccaacaaggtgtccgctacctgcacacagcttccacccagtcccccaacaag
gacttcatacccatgctggtggagctgcatgacaaagtgggcaaccttctgaaacaggag
catttccaggtcctggtccgtgtcaaggaaggcttggagaacacccaacccaagcctagc
ttcattgccatgatgatgatggaggtggaccagtttgtcatgacagccatcaccccagat
atgctggccgctgaggacttagaatctgaccctggggacctcatctttaatgtcacctcc
aattttgtcccagggcaggggcagattgtcagcaccgatgaccgcaacttacccatcacg
tctttttaccagagggacctacaggagctcaggattgcctacaagcccccacccgaggac
tctgatactgagcgaatctttgaagtggagctggaggtggtggattcggagggggcagta
tcagagcccttctccttcatgattgttgtaaaacccatgaacacaatggctcctgtagtt
accagaaacacaggtcagctcttgtttgaaggacagtctagacctttattcagtggccag
aacctgcagatcagtgatgaggacaacctggatgacgttagagtcagtgtgttggatggt
ctgaggcatggacagctttatctgttaggatcccctcctgagagctccaagttttttaca
gcctctgatctggaccagggtagggttatctatcaacatgatggcagtgacacctacagt
gacaacatcattttccggatgactgatgcaaagcatgaagtggaattcctttttccaatc
acggtggtgccaaccgatgatgagcctcccatagtaaatgccaacactggtttgatgctt
tcagaaaaagaagtggcccccgtgacacctctggtgttgagtgctacagacattgactca
gaggactccaccatacgttttatcttagagttgccatactcgaccctggggcaaatggtg
ttgcgccaatctgagataccacaagatccttctgaatggcagttcatccccaatctaaag
atgtatgagaaggtggtaagtgaatggactcagcaagatatattggatgggaaattatat
tacaaacatattgggccccatagcactgtcccagtcatggaccagcatgtctttagagtc
caagatgacaacgatcctccaaaccaatctggggagcacacctttgtggtgaaaattaac
cctatagacgacttacctccagaactatacccaggtaccacccttaagatggtagtgcag
gaataccatttaacttactttagaaagaaatttctccgttatactgacttagattctgat
gacagggacctgaaatacacagtgaccatccctccatcagacacagatgagaacaaccct
gctatcatgggcttcatagtcctttctgaaaacccagatctagtggtcacagagttcacc
caagctcagataaaccatcataagatttcctacaaaccgccagacctagaactcgggatc
acccctcgcgttttacaatttcattacacggtagaggacatgtctggcaatttagctgaa
ggggatttcaccatatttctgcagccagtggacaacaagcccccaaatataataaataca
ggctttacagtgtttgaaagaggaagccatgatatcaccgaagcagagctcgatgccact
gatgctgacacgggtagagataaaataacttttaccctcactcagtccccaagacatggg
caagtgctgtactctaaccaagtgatggatgtgggggaatcatttgtgttggatgacatc
cgaaatgggaaaataagctacatgcacagtggtgaagaatctgccagtgattccttcact
ttggatgtaagtgatggggtgcatgtcctcactattatcattaaaatcactgttcggctg
gtggatgatgaagtacccaggatcatgctaccaactggaaccattggctcctaccttgat
gttttggaaggaggttcagctgaaatcacatctaacgttatccaaggcacagatgcagac
acggatgacctcatgctaacattcatcgttgaagacccacctcgtcttggagaaattcta
gtcaatgggctaccctctgaaaggttttcccagagagacataattgatggggcagttatt
tattcccacagtgcaggagaaatcgggctacaaaaaatggaagactctttcaatttaaca
ttatctgacctttcggaggaatggactgtcggaggtaatcgagttaccggagtacgggtt
caagttaccattctgcccattgataaccaggcccccctagttacagtaggtgaacagttc
acagttattgaaggtgaaaaaaatgttataacctcatcaaatttaagagcacaagataca
gacacccccaacgatgacattctgtgcactatcgttgtccaacccacatctggctaccta
gaaaatatctcccctgcaccaggatctgaaaaatcgagagctgggactgctattagtgca
tttacattgaaagatataagaataggtcatatctattatgtgcaaagcatccacaagggc
gtggaaccagtggaagataggttgacgttccactgctctgatggcatcaacttttcccag
aagcacttctttcctattgttatcattccagccaatgatgaaaagcctgagattttcatg
agggaattcgtagttatggaaggaatgagtcttgttatcgatattcctatattaaatggg
gcagatgctgatatcccaacagatgaacttgtcttttttatcaccaagccaccgaaacat
ggcaatatcgttaaccagttcaccaatggtactgtgatagtcaacagcttcaacctagag
gacatcaaagagagctccaccatcctttatgaacatgatgactccgagaccaaagaggac
agttttgacataaaacttactgatggaaaacattcagtggtcaaaactgttctgattatg
attatacccgtggatgatgagacccctagaatgaccatcaatgatgggttggagatagag
atagaagaaacaaaactaatcactaataaagtccttaaggccacggatttggactctgat
gacaaaactttaaccttcattttacgctatggacctggacaaggtttgcttcaaagaaga
aagccaaacggtggactagaaaatataaccataggtatgaactttactcaggacgaggtg
gacagggaattaatacaataccagcactttggccaagagggcatccgagatctgttcaag
tttgatgtcactgatggaattaatccccttatcgatagatacttttatgtcacagtggga
ggaattgatatggtctttccagatgtagttaataaaggagtgtctttgaaagaaggaggc
aaagtaacacttaccactaacttacttagcactagtgacctcaatagcccagatgaacac
ttggtttttacaatcaccagggccccggtgcgtgggcacttggaatgcactgactttcct
ggggtgcccatcacatccttcactcagctccagttggcgggtaataaagtctactacaca
cacacgtccgatgatgaagtgaaaatggacagctttgaatttgaggtcaccgacggatat
aatccagtttttcgcacattcagaatatccatcagtgacgtggataacaagaagccagtc
ctgaccatccatgaagtaacagtgagagagagtgaaaataaactcatcaccccctttgaa
cttacagtagaggacagggacactccagacaaaaggctgagatttgtaataacccaagta
ccagtccatgggaaaatcctgtataacaacagtagaactgtgacctcttttacaaagcaa
gaccttaatgataacctgatcagttataagcatgatggcacagagactacagaggacagc
ttctccttcactgtcaccgatggcacccatactgacttttatgtgttcccggatactgtc
tatgagacaaggcagccccagatgatgaaaatacgtataatagcagtggataatggcgtg
ccacagattatcgtaaacaagggtgccccaactctccgaatcctgagtactggccatttg
ggatttttaattaccaacaaggtccttaaagccgaggacagggacagtgtccacctttcg
ctccgtatccgagtcacgcaaggtcccagccatggattcctcatcaatacggacaaggga
aaccatagcataaaccagttttctcaagcggacatcgatgatatgaaaatctgctacgtt
ttacgggacaaagaaaacgcgactagtgatatcttctatttcactgtggaagacagcgga
ggaaacaagttgaagaatcagcactttcgtctgaactgggcctggatttcaatagaaaag
gagtactatgtggtgaatgaagatgccaaacatttagagatcatcttgaggcgtagagga
tacctgggcgaaacctcctttgtcggtattggcactgtggatggcacagcagaaaaggac
aaagactttagagggaaagctcagaaacaagtccagtttaatccaggtcagaccacagca
acatggagagtgcgcatcctaactgatggagagtatgaacagtctgaaaccttccagata
gcactgtcagagcctgtcatgggggccttggagtttccagaagtgacaactgtggagatc
attgaccctggagatgaatcaaccgtttttatacctcagtcaatctataaaattgaagaa
gatgttggtgagctctttataccagtcaagagaagtggggatgttagtcaagaactgatg
gtgatatgttttacacatcaaggtacggctactggaactgtcccaacatccgttttatcc
tactctgattacatatccaggcctgaggagcacaccagcgttctgaggtttgataagggg
gaagaggagaaaacgtgccgtgtggtgatcatagacgattcattgtacgaggaagctgag
actttcaatgttacactaagcatgcctatgggaggaaggctgggcactgaattcccttct
gctcagatcatgattctacccgacaaggatgatgaacctgctttctactttggtgatgtg
gaattgtatgtggatgagagtgcgggatacattgaagtgcgtgtttggcggacaggtact
gatctgtcaaaaaccgccacagtcactgtgcgctcacagaagacagaaccagtgtcagca
gttgctggcattgactatgtaggtatcagtcggaatctagattttgcaccaggtgtcaac
atgcagacattccgtgtggttattctggatgacttgggacagccagtactggagggaatc
gagaagtttgagcttgttctgcgtatgccaatgaatgctgttcttggggaacccagcaaa
gctacagtgttcatcaatgatacagtctctgacttaccaaaagtgcagttcagagaacca
atgtacatgggcaaggaaaaggatgggaagatcacagccatggtctacagaagtggggat
gtcagttataagtctacagtacgttgttatacccgacaaggatctgctcaagtgatgatg
gactttgaagagcgaccaaacacagatagctcaatcatcaccttccttccaggagaaaca
gaacggccttgcactgttgtgcttgtggacgattcaattcacgaagaggaggaagagctg
cgactggtccttggcactccaaaaagcgattccccctttggagcgtccattggagaactc
aacgagactttgataaagattaaagatgacgcagacaaggcaatcataaagtttggagac
accaagtttagtgtgagtgagccaaaggaacccggacaaatcgtagttgtaaaaattcca
gttgttcgtctaggagacacttcaaaggtctccattgtgcgtgttcacacaaaggatggc
tctgctacctctggagaagattacaaccccgtgtcagaagaaattgagtttaaggaaggt
gaaacccagcacattgtggagattgaagtgctgtatgatggagttagagagatgagggaa
gcctttactatacatttgaaaccagatgaaaacatggttgcggaaattcagatggctaaa
gccattgtttacatcgaggaaatgaacagcatggcagacgtgacgttcccctcagttccc
caggttgtttctctttttatatatgatgacacctctagagccaaagacaaccccaaccct
gtatctgggtatcctgttgcctgcattacagcttgcaatcctaaatattcagactatgat
aaaactggctctatatgcaccagtgaaaatatcaatgacacgctgacccgttaccgctgg
ttggtcagtgcccccaagggtctggatggagtgaccagtcctatgagagaggtggacttt
gacacattcttcacatcctcaaaaatgatcactctggattctatatatttccatgccggt
tctcgggtgcagtgtgcggcgcgtgcagttaactcagaaggacatgaaggtctggaactt
ctgagtaccattgtgacaataagcacggatgatggtctttgccagcctagagtggccgga
gcagtgggagcagaaccattctctgctaaaatgcgatatacgggaccggaagaccctgac
catccaaatctcattaaagtcaccgttactctgcctcacattgatggcatgttgccggtt
gtttcaacaagagaaatgtctaactttgagctaacgctcagccccgatggtactcgggtt
ggaaaccacaaatgttccaatcttctagacttcaatgaagttagaacaaattatgggttt
ttaacagatgccaccaagaaccccaatgtcataggcgagacgtctccttaccagtacagc
acacagctccgtggctccaatacactgcgtttctaccgcaatctgaacctggaggcctgc
ctgtgggagttttccagctattatgatatgtctgaactactgacggaatgtggaggaaca
atcggaactgatggacaggtcttgaatcttgtacagtcctatgtaaccctgcgggtgccc
ctgtacgtgtcctatgtgtttcactctccggtgggagtcggtggctggcagcatttcgat
ctgcactctgagctgcggctcacatttgtgtacgacaccgccatcttgtggaaggatggt
atcggtagcccgccagaagctgaattacaaggttctctgtacccaaccagcatgcgtatt
aatgaagagggacgcttggtggtcaattttaagaccgaggctcgttttaatggtcttttc
ttgatgtcacatcccggatcctcactgagctctatggtcatgtcagctgatcaccctgag
ctgatctttacactaggtcttgtacgcagtgaaccaacctttaaccagccagttcagcag
tggagctttgtttctgaatttgcggtccgggattactctggaacgtatactgtgaaactc
atcccctgtaccacagctccatatcaagtctatagcctaccagccgtgtgtaatcctcgg
gagccaataacattcgacgttgacatcagattccaacaggtcagcgatccagtggctgca
gagtttaatttgaacacccagctgatacttctatctaaaaagtctctctggttgtcggat
ggatcgatgggatttggccaagaaagtgacatagcttttactgaaggtgacatcatttat
ggtcgggtgatggtggaccctgtacagaacttgggtaattcattttattgtaatattgag
aaggtcttcctgtgcactggagcagatggttatgtcccaaaatataacccgtccaacggt
gaatatggctgccttgctgattcgacatctcttctgtaccaaataaaaattttggacaaa
gcacagccagaaactcagactaccaggtttggcagtgtggtgtttaacgccaggcttgct
gcagatgatccagaggcgttgcctctagtcagacagccgggttcggatggatttaaaatt
gactccactcctttgttccaggtgtctacaggacgagagtggtatatacacacaatatat
actgtaaggtccaaagaaaatgcaaacagaggcattggaaaaagaagcgttgattatcag
taccattcagtattgaattctggtccttcagggggttcagcagctcgtaagaaaagagat
gtcagtgaagccccaacgattgctcaggatattggcatggataacaacagaggaaccaat
atccaacacataatactggatagcagcaacaagaagactgctccagagaaggaaattact
gttgatgggattattcctagagagctgaataaaaatgaaagcgaggtcaacgtggttatc
attgtagtcatcctggcagcaatattactacttgtggtctgtttgatagccattgttgtt
ttcctgcttagacgcaagcagaaatctaaaaagaaggaagaaggccaagaaacaggaagt
agtgagcccatgatgccgcatcgtggttacagtaccgacagctcagaggtttga
DBGET
integrated database retrieval system
