Rana temporaria (common frog): 120929154
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Entry
120929154 CDS
T07929
Symbol
NBEA
Name
(RefSeq) neurobeachin isoform X1
KO
K24183
neurobeachin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120929154 (NBEA)
Membrane trafficking [BR:
rtem04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
120929154 (NBEA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
Laminin_G_3
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
DUF4800
PIGA
Motif
Other DBs
NCBI-GeneID:
120929154
NCBI-ProteinID:
XP_040196339
LinkDB
All DBs
Position
2:complement(76085956..76879789)
Genome browser
AA seq
2905 aa
AA seq
DB search
MASDKPLVGVGCPDRDPPGGSGSMVLPGGVINPSVPIRNMRMKFAVLIGLIQVGEVSNRD
IVETVLNLLVGGEFDLEMNFIIQDAESITCMSELLEHCDVTCQAEIWSMFTAILRKSVRN
LQTSTEVGLIEQVLMKMSSVDDMIADLLVDMLGVMASYSITVKELKLLFSMLRGENGIWP
RHAVKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNN
INVDKDKPYLYCYRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISI
VHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAV
YVFIEALNPAQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAK
ATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLD
NRQLTDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAV
LEQFLSFAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATI
YTTIRRVGTVLQLMHTLKYYYWVVNPADSSGINPKGLDGARPSQKEIISLRAFMLLFLKQ
LILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVI
YKLLASKSESIRVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTY
NTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSSPSSDLMEVRRLFLS
DMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKSSEEQKITEMVYNIFRILLYHAIKY
EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSQA
AAAKGGLEIREIEDLSQSQSPESETDYPVNADTRDLLIATKISDDTITNTDRPAGGVRVE
VHDLLVDIKAEKVEATEVKLDDLDLSPETLVTGENGALVEVESLLDNVYCAAVEKLQNNV
HDSVGIIKETEEKDGPLITLADEKDQTTSNNTSFLFDKMTNSEDKLLPELTGGNHLTIGN
VQDAHVHLGVNDDLGLLAQMTGSVDLTCASAVIGEKDFKIHTTADSLGSLSDRELASSSK
ALEYAQMTTTTLETESSTSKSLVNIDASSTVSDTERSDDGRDLGKEIKKIQTTTTTTQAV
QGRSMSQQERDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLF
ALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAATS
PTGSKVSISDTELENIEVTQGMSSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS
GGLMRQCLRLVCCVAVRNCLECRQRQRERVTKPASGGKIPDNMQNVPASSTAKTPVDNVS
GNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEP
QRETARSANQSARNIRQEINSPTSTDTPALFPDIKDKDTLTPTEELHLEGSIPHTDSGIG
DEHISSILNGTDLDHSMSPDVMGELLSTLSSDVKKSQESLTDSPSEMLKPAPSISSISQS
KGINVKEILKSLVAAPFEMAEAGPDPVPYPDPALKREAQVILPMQFHSFDRSVVVPVKKP
PPGSLAVNTVGTGNLTPSTTPNIFAATGATPKSMINTTGAVDSASSSSSSSSSFVNGATS
KNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQEL
LIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVA
NEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQK
ILNILTNKHGAWGAISQSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHSDARLKSAIEYG
TDEDVMKSKKTFRSQAAVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIA
PIVVAKGTLSITTTEIYFEVDEEDPSFKKIDPKVLAYTEGLHGKWMFSEIRAVFSRRYLL
QNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLFKS
SNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRD
LSKPIGALNPKRAVFYAERYETWEDDQTPPYHYNTHYSTSTFTLCWLVRIEPFTTFFLNA
NEAKFDHPDRTFSAVARSWRNCQRDTSDVKELIPEFYYLPEMFVNSNAYNFGVRDDSNVV
NDVDLPAWAKNPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLT
YERSVNLESVTDAVLREIPEAYFKRNPYTFLLTGEFVKAMEAQIQNFGQTPSQLLIEPHP
PRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCS
RMFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDSLIANNSGVNKRQITDLVDQSIQINAH
CFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVS
GSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKE
GPCLVHTITGDLLRALEGPENCLYPRLISVSSEGHCIIYYERGRFCNFSINGKLLGQMEI
TDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLIT
GMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8718 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgacaagccgctggtgggggtcggctgcccggacagagatcccccgggagga
tcgggatccatggttctccccggaggggtgatcaacccgtccgtccccatccgcaacatg
aggatgaaattcgccgtcctcatcggcctcatccaggtcggggaagtcagcaaccgggac
atcgtggagaccgtcctcaacctgctggtcggtggcgagtttgatctggagatgaatttt
attattcaagatgcagagagtattacctgcatgtcggagctgttggagcactgtgatgtg
acgtgccaggctgagatctggagcatgtttacagccattctgcggaagagtgttcgtaac
ttacagaccagcactgaggtcggcctcattgagcaagtgctaatgaaaatgagttctgtg
gatgacatgattgcagatcttctggtggacatgttgggagtgatggccagctacagtatc
accgtcaaggagctgaagcttctgttcagtatgctgcggggagaaaatggaatatggcca
aggcatgcggttaaattgttatcagtcctcaatcagatgccacagagacatggacccgac
accttcttcaatttcccaggacggagtgctgcagctattgcgctgcctcccattgccaag
tggccttatcaaaatggtttcactctgaacacgtggtttcgtatggatccattaaataat
ataaatgttgacaaggataaaccttacctctattgctatcgcacaagtaaaggtgttggt
tattctgcacattttgtgggtaactgtttgatagtcacttccctgaaatcaaaaggaaaa
gggttccagcactgtgtgaagtatgatttccagccacgcaagtggtacatgatcagcatt
gtacacatctacaatcgctggaggaacagtgaaattcgctgctatgtaaatggccagtta
gtatcttatggagacatggcgtggcacgtcaacacaaatgatagttacgacaaatgcttc
ctggggtcttcagagacagctgacgcaaacagagtgttttgtggtcaacttggagcagtg
tatgtgtttatagaggctcttaatcctgctcagatcttcgcaatacatcagcttggacca
ggctataagagtaccttcaagtttaagtctgagagtgatattcatctggctgaacaccac
aagcaggtcctgtatgatgggaaacttgcaagcagtatagcgttcacatacaacgcaaaa
gccaccgatgcccagctctgccttgaatcgtcaccaaaggaaaatgcttctatatttgtg
cattcaccccatgcgctaatgttacaggatgtaaaagctatagtaacacactccatacac
agtgcaattcattcaattgggggcatccaggttctctttccactatttgcacagctggac
aatcggcagctgactgacagccaggtggaaaccacagtttgtgccaccttgctggccttc
ttggtggagctgttgaagagttctgtggctatgcaggaacagatgctgggaggaaaaggg
tttctagtcattggctacctcttggaaaagtcctccagggtacacataacaagagcggtg
ctggagcagtttctatcatttgcgaaatacctggatggtctatctcacggggcaccttta
ctgaagcagctttgtgatcatatcctcttcaaccctgccatttggatacacacaccagca
aaggtgcagctctcactgtacacctatctgtcagctgagtttattggcactgccacaatc
tacaccaccatccgaagggtgggaacagtattacagctaatgcacacactgaagtactac
tactgggttgtaaatcctgctgacagtagtggcataaaccctaaagggcttgatggcgcc
cgaccttctcagaaagaaatcatttccctgagagcatttatgttgctgtttctgaagcag
ctcattttaaaggaccgaggggtcaaagaagatgaactacagagcattttaaattacctg
ctaacgatgcatgaggatgaaaatattcacgatgttctgcagcttttggtggctctcatg
tctgaacatcctgcatcgatgataccagcatttgatcagaggaacggaatacgggtcatt
tataagctactagcatctaaaagtgaaagcatccgtgtgcaggcactaaaggtcctgggg
tattttctcaagcacctaggccacaaacggaaagttgaaatcatgcacactcacagtctc
ttcacattgctcggggaaaggttgatgctccataccaacacagtcactgttacaacatac
aacacactttatgagatcttgacggagcaggtttgcactcaagttgttcacaagcctcat
ccagagccagattcaactgtgaagatacagaatccaatgattcttaaggtggtggccaca
ctactgaaaaactcctctccaagttctgaccttatggaggtgagacgcctttttctgtcc
gacatgattaaactcttcagcaacagccgggagaatcgaaggtgcctcctacagtgctct
gtgtggcaggactggatgttctctctcgggtacatcaatccaaagagctctgaagagcag
aagataacagagatggtctacaacattttccgaatacttctttatcacgcaatcaaatat
gaatggggaggctggagagtctgggtggacacactttctatagctcattctaaggtcaca
tatgaagctcacaaggaatacttggcaaagatgtatgaagaatatcaaaggcaagaagag
gagaatatcaagaagggtaaaaaaggaaacgttagcaccatatctggtctctctcaagct
gcagctgctaaaggcggactagaaattagagaaattgaggacctctcccagagtcagagc
cctgaaagtgaaacagactatcctgtcaatgctgacaccagagatctgctcatcgccaca
aaaatttctgatgatactatcactaacactgatagaccagctggtggggttcgggttgag
gttcatgaccttctggtggacatcaaagcagaaaaggttgaagccacagaggtaaaacta
gatgacttagatttatctccagagactttggtcactggagaaaatggtgctttggttgaa
gtagaatctttattggacaatgtctactgtgcggctgttgaaaaacttcaaaacaatgtt
catgacagtgttggcattataaaagaaactgaagagaaagatggtcctctgatcacacta
gcagatgagaaagaccaaaccacttctaacaatacctcattcctttttgataaaatgaca
aattcagaagacaaactgttgcctgagctgactggtggtaaccatctaaccattggcaat
gtccaggatgctcatgttcaccttggtgttaatgatgaccttggtctgctggcacaaatg
acgggtagcgttgaccttacttgtgcatcagctgtgatcggggaaaaagattttaaaatc
cacacgacagctgatagtttaggaagcctttctgatcgagagttggcttcatcgtcaaag
gcgctggaatatgctcaaatgactactaccactctggaaactgaatcatctactagcaaa
tccttagtaaatattgatgctagcagtacagtctctgacactgagaggtccgatgatggt
cgggatcttggaaaagagatcaagaaaatacagaccactacaactactacacaggcagta
cagggccgctctatgagccaacaggaacgggacctacgtgttgacttgggattccgtggg
atgccaatgactgaagaacaaaggcggcagttcagccctggtccacgaaccaccatgttc
cgtattccagagttcaagtggtccccaatgcaccagcgacttctcacagacttattgttt
gctttagaaacagatgtgcacgtgtggaggagccattccacaaaatcagtcatggacttt
gtcaatagcaatgaaaacatcatctttgtccataacactatccacctgatatcccaaatg
gtcgataacatcatcattgcttgtggaggaatattgcctttgttgtcagctgccacctcg
ccaactggttctaaggttagtatatctgatacggaattggagaatattgaagtgacacag
ggtatgtcatctgagacagcggtgacgttcctcagccgtctcatggccatggtggatgtc
ctggtttttgccagttccctgaatttcagtgagattgaagcagagaagaacatgtcatct
ggtggcttaatgcgacagtgcctgaggcttgtttgctgtgtagctgtacgaaattgcctg
gagtgccggcaaaggcagcgggagcgagtaaccaagcctgcaagcggtggaaaaatccca
gataatatgcagaatgtgccagcttcaagtacagccaagacccctgtggacaatgtttct
ggtaatctttcaccaatcaaggatcctgatcggctactccaagatgttgatattaatcgc
ctcagagcggtagtgttccgtgacgtggacgacagcaaacaagcccagttccttgctctg
gccgtagtttactttatatctgtattaatggtgtctaaataccgtgatatactggaacct
cagcgagagacagcacgctctgccaaccagtctgctcgtaacatcaggcaagaaattaac
tcgccaacgagtacagatacacctgctctgtttccagatatcaaggataaagatacgctg
acccccactgaagaactccatttagaaggctctattcctcacacagactctggcattgga
gacgaacatataagcagcatcttaaatggaacggatcttgaccatagtatgagcccagac
gtcatgggtgaattattgtctacattgtcgtctgatgtaaagaagtcacaggaaagcctg
accgacagcccaagtgaaatgctaaaaccagctccctccatatctagcattagccaaagc
aaaggcatcaatgtcaaagagatcctaaagagtctggtcgctgctccctttgagatggca
gaggctggaccagacccggttccctatccagatcctgctttaaagagagaagcccaagtc
attcttcccatgcagtttcattcctttgacagaagtgtcgtggtacctgtgaagaaacct
ccgcctggcagtttagctgtgaacaccgttggcactggtaacttaacccccagcacaacg
ccaaatatattcgctgctactggagcaactcccaaaagtatgatcaatactacaggtgct
gtggactctgcctcttcctcttcctcctcatcctctagttttgtaaatggtgctacaagc
aaaaatctcccagctgtgcagacagtggctcccatgccagaggactctgcagaaaatatg
agtatcactgccaaattagaacgagcactagaaaaggttgctcccctcctgcgagaaatc
tttgttgattttgctcccttcctgtcccggacactcctcggtagccatggacaagagctg
ctgattgaaggacttgtatgtatgaagtccagtacctcagtggtagagctagtcatgctg
ctttgctctcaggaatggcaaaactcgattcagaagaacgcaggattggcatttattgaa
ctcatcaatgaaggaagactgttgtgccatgccatgaaggatcacatagtgcgggttgct
aatgaagcagagttcatcttgaacagacagcgagcagaggatgtacacaaacatgctgag
tttgagtcacagtgtgctcagtatgctgcagacagaagagaggaagaaaagatgtgtgat
catctcatcagtgcagccaaacatagggaccatgtgacagccaatcaactaaaacaaaaa
atcctcaacatcctgaccaataagcatggagcatggggagcaatatctcagagtcaactc
catgatttctggcgactggactattgggaggatgacctaaggcggagaagacgttttgtg
cgcaacgcattcggctcaactcattcagacgcccgcttaaaatccgccattgaatacggc
acagatgaagatgtcatgaaatcaaagaagactttccgaagccaggctgctgttaatcaa
aatgccgaaactgagctaatgttggaaggggatgatgatgctgttagtctgcttcaagag
aaggaaattgacaaccttgcaggtccagtggtgctgagcaccccagcacagctcattgca
cccatcgtggtggccaagggcaccctctccatcaccaccactgaaatctacttcgaagta
gatgaagaagaccccagcttcaagaagatcgaccccaaagttcttgcttacactgagggc
ctccatgggaaatggatgttcagcgagattcgagctgtcttttccaggcgctatctctta
cagaacaccgcactggaagtgtttatggccaaccgcacctcagtcatgtttaattttcct
gaccaagccaccgtgaagaaagtggtatacagtttacctcgtgtaggtgttggcaccagc
tatggcttaccacaagccaggcgaatatctctggccactcctcggcagctttttaaatcc
tccaacatgactcagcgttggcaacgacgagagatttcgaactttgaatacttgatgttc
cttaataccatagcagggcgaacatacaatgacttgaatcagtatcctgtattcccatgg
gtgttaacaaattatgaatccgaagagctggatttaaccttaccaggaaacttcagggat
ctttcaaagcctattggtgctttgaatccaaagagagcagtgttttatgcagagcgctat
gagacgtgggaggatgaccagaccccaccctaccattacaatacacattactccacctcc
accttcacactatgttggcttgttcgaatcgaacctttcactacattttttcttaatgcc
aacgaagccaagtttgaccacccggatcgaacattctctgctgtggcaagatcgtggaga
aactgccaaagagacacatctgatgtaaaggagctaattccagagttctactacctaccg
gagatgtttgtcaacagcaatgcttataactttggtgtaagggatgacagtaatgttgtt
aatgatgtagatctgccagcctgggcaaaaaatcctgaagattttgttcgcatcaaccga
atggctctggagagcgaatttgtatcttgtcagctacatcagtggatagatctgatattt
ggctacaagcagcgaggtccagaagcagtgcgtgcactaaatgtttttcattatttgacg
tacgaacgttccgtgaacttggagagcgtcacagatgctgtattacgagagattcctgaa
gcatattttaaaagaaacccctatactttccttctcactggggagtttgtgaaggccatg
gaggcacagatacagaattttggacagacgccatctcagttgcttattgagccacatccg
cctcgaagctcagccatgcacctgtgtttccttccacagagccccctcatgtttaaggat
cagatgcagcaggatgtcattatggtgctgaaatttccatccaactctccagtcacccac
gttgcagcaaatacccttccccatctcaccatccctgcagtggtgactgtcacatgcagc
cgaatgtttgcagtgaataggtggcacaacactgttggcttgagaggagcacctggttac
tcactggaccaagctcaccatctccctattgagatggactctttgattgccaataactct
ggagtgaacaagcgtcagattactgatcttgtggatcaaagcattcagatcaatgcacac
tgctttgtggtcacagctgataatcgctatatccttatctgtggattctgggacaaaagc
ttcagggtatattcaacagaaacagggaagctcacccagattgtgtttgggcactgggat
gtagtcacttgtttggcgaggtctgagtcctacattggtggtgattgctatattgtgtcg
ggatcccgtgatgccacgctacttttatggtattggagtggaagacatcatatcattgga
gacaacccaaataacagtgattacccagctcccagggctgtcctgactggccatgaccat
gaagttgtctgtgtatcagtatgcgctgaactgggtctcgtcatcagtggagctaaagag
ggtccatgcttggtccacaccatcactggagatctactcagagcactggagggcccggag
aattgcttataccctcgtttgatttctgtttccagtgaaggccattgtattatatattat
gaaagagggcggttttgcaacttcagcattaatggcaagcttctgggccagatggagatc
accgattcaaccagggcaatccttctgagcagtgatggccagaaccttgtgactggtgga
gataatggtgttgtagaagtctggcaagcttgtgatttcaaacagctctatatttacccc
ggatgtgatgctggaatccgagcaatggatctgtcacatgatcaaaggacattgatcact
ggcatggcttctggtagcattgtagcttttaacatagattttaatcggtggcattacgaa
catcagaacagatactga
DBGET
integrated database retrieval system
