Rana temporaria (common frog): 120929228
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Entry
120929228 CDS
T07929
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
rtem03420
Nucleotide excision repair
rtem04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120929228 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
120929228 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120929228 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtem01001
]
120929228 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120929228 (CDK7)
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120929228 (CDK7)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120929228 (CDK7)
Enzymes [BR:
rtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120929228 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
120929228 (CDK7)
Protein kinases [BR:
rtem01001
]
Serine/threonine kinases: CMGC group
CDK family
120929228 (CDK7)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120929228 (CDK7)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120929228 (CDK7)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120929228 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
120929228
NCBI-ProteinID:
XP_040196455
LinkDB
All DBs
Position
1:93601857..93631028
Genome browser
AA seq
392 aa
AA seq
DB search
MCEAMCRACGALSLAEVEQWAGRGVKCRGLVRQVDAELRRMEGSATKGIEVKSRAKQYEK
LDFLGEGQFATVYKARDKNTDKIVAIKKIKLGHRAEANDGINRTALREIKLLQELSHPNI
IGLLDAFGHKSNISLVFDFMETDLEAIIRDTSLVLTPAHIKSYVLMTLQGLEYLHHLWIL
HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRSPELLFGARMYGVGV
DMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEDQWPGMSNLPDYVTFKSFPG
TALDQIFTAAGDDLLELLQGLFTYSPCARYTASQALKKKYFSNRPAPTPGHLLPRPNCSV
EALKEQQNLTLGIKRKRVEGAEQKDIVKKLNF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagcgatgtgtagggcatgtggcgctctgtctctggcggaagtagagcagtgg
gcggggcgtggtgttaaatgccggggccttgtcaggcaggtggatgctgagctgaggagg
atggagggttcagccactaaggggatagaggtgaagtcccgggctaagcagtatgagaag
ctggatttcttgggggaggggcagtttgctacagtctacaaagccagggataagaacaca
gataagattgttgcaataaaaaagattaagttgggtcaccgagctgaggccaatgatggg
ataaatcgaacagccttgagggaaatcaaacttcttcaagaattaagtcaccctaatatt
atagggcttttggatgctttcggacataaatcaaacataagtctggtatttgatttcatg
gaaacagatttagaggccattataagggataccagtctagtcttgactccagcgcacata
aagtcttatgtgctgatgactcttcagggcttggagtatttgcatcatctctggatcctg
catagggatttaaagccaaacaacttgttactggatgagaatggagtccttaaactggct
gattttggtttggccaaatcatttggaagtccaaacagagtgtacacccaccaagtggta
acgaggtggtatcggtctccagagttactatttggtgccagaatgtatggtgtgggtgtt
gacatgtgggcagtcggctgtattttggcagagttgctgctaagggtgccttttctgcct
ggggattctgatttggatcaactcacaaggatatttgagacattgggtactccaacagaa
gatcaatggcctggcatgtctaacctgccagactacgttacctttaaaagctttccagga
acagcactagatcagatattcactgctgcaggagatgacctgctagaactcttacaaggt
ttattcacatacagcccctgtgcacggtacacagcctcacaggcactaaagaaaaaatat
tttagtaacagaccagcaccaacacctggacatttgctgccaagaccaaactgctcagta
gaggcattaaaagagcaacaaaatcttaccctgggcattaagaggaagcgagtggaaggt
gcagaacaaaaagacattgtaaaaaagctgaacttttga
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