Rana temporaria (common frog): 120929258
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Entry
120929258 CDS
T07929
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtem03009
]
120929258 (DDX10)
Enzymes [BR:
rtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120929258 (DDX10)
Ribosome biogenesis [BR:
rtem03009
]
Eukaryotic type
90S particles
Helicases
120929258 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
120929258
NCBI-ProteinID:
XP_040196503
LinkDB
All DBs
Position
2:complement(98175254..98496148)
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AA seq
940 aa
AA seq
DB search
MANLMQWTSWQEDRAAIVDVLKLTTTDCITRSLYQSLFCIGCRQRAPLRDSPVTCSVRVP
HWEDVISARLAHVSVCTGRRREIREISMGEPDSLQEKKKQPSLFNNRNDPVKNFEKWKKK
YTKKKEKCKITRKQNRTPEWQTERETISRLVQRYTEVNASEISRFSDFPLSKKTIRGLVE
AQYRLPTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLIPAVECLYRQQWTSDDGLGILI
ISPTRELAYQTFEVLRKVGHNHEFSAGLIIGGKDLKQESARIHRTNILICTPGRLLQHMD
ETSFFHTSSLQMLVLDEADRILDMGFADTINAIVENLPKKRQTLLFSATQTKSVKDLARL
SLKDPEYVSVHEKAKFSTPATLEQNYTVCNLPQKINLLFSFVRNHLKKKSIVFFSSCKQV
QYLFRAFCRLRPGIPILALHGKQQQMKRMEVYNDFVRKKAAVLFATDIAARGLDFPSVSW
VLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMARQLEEKKVPINEIKINPE
KLLDVQGRLEAFLAQEQEMKERAQRCFVSYLRSVYLMKNKDVFDVSKLPLAEYAQSLGLA
VAPRVRFLQKAQNSQPLVPRPNEKPKEPGTDSDEEIKSFKAQLDGRTPVEMDGERSVSSS
EGEDNSEDEENIERLKAKDKSTFHFTNEDDDEEDDCRDVEIFTVKRRDVFGVKDGEAAPA
EETTKSKLKKTILTKAKDAKKALKKKFKVNTKIVFADDGEAIQQWPQMQKMVKDAGEEED
ADNGINLEIARKRLTEEDKFDKELYRQKIKEKHREKRLKEKAARRTSSRRDKEEGEDEAV
AYLDHDGDNEVDLSALPDPDKYRDMEEDEQTVEESSSDGEEVPPRKRTFSSRSNEKEEKI
VAAKKTKATQRSEEPFEPLNTGLSLAEDEELVLHLLNSSS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttgatgcaatggacatcatggcaggaagaccgtgctgctattgtggatgtg
ttgaagctgaccaccactgactgcatcactcggagtctttaccaatcattattttgcatt
ggatgtagacagcgggctcctctcagagacagtcctgtcacgtgctcagtacgggtcccg
cactgggaggacgtcatcagtgcgcgcctcgcccatgtgtctgtgtgtacaggaagacga
agagagatcagggagatcagcatgggggaaccggacagcctgcaggagaagaagaagcaa
ccgtcgctgttcaataataggaatgacccggtaaagaacttcgagaagtggaagaagaaa
tacaccaagaagaaggagaagtgtaagatcaccaggaagcagaacaggacgcctgaatgg
cagacagagagggagaccatcagccggctggtgcagcgctacaccgaggtaaacgccagt
gagatttctagattctcagactttcccttgtccaaaaaaactattcgtggtttggttgag
gctcaataccggttacctactgagatccagaaacagacgatcggattggccttacaggga
aaggatgttcttggagctgctaaaactgggtctggaaaaaccctggcttttcttattcct
gctgtggaatgtttgtaccggcagcagtggacatcggatgatgggcttgggatcctgatc
atctctcccaccagagagttggcttatcagacgtttgaggttctgcgaaaagtgggccat
aaccatgaattttctgctgggctcatcattggaggaaaggatctaaaacaagaatcggcc
cgtatccatcgcacaaacattctcatctgtactcctggtcgtctcttacaacacatggat
gaaacatcgtttttccatactagtagtctgcagatgctcgtgcttgatgaagctgaccgg
atcctggacatgggttttgctgatacaataaatgcaattgtggaaaacctgcccaagaaa
cgacagaccctcctcttctccgcaactcagactaaatctgtgaaggaccttgctcgtctc
agcttgaaagatccagagtatgtgtcggttcacgagaaggcaaaattcagtacaccggca
actctggaacagaattatacagtgtgtaatctcccgcaaaaaataaacctcttgttttct
tttgtgcgtaatcacctgaagaaaaagagcattgtcttcttctctagctgtaaacaggtt
cagtatttgttccgtgcattctgcagactgcggcctggtatccccatcctggcactgcat
ggcaaacagcagcagatgaagaggatggaggtctataatgactttgtgaggaaaaaggca
gctgtgctttttgctacagacattgcagctcgaggattagatttcccatcggttagctgg
gtgcttcagctggattgccctgaagatgctaacacttatattcacagagttgggaggaca
gccaggtacaaggagggcggagaagcgttactggttctgttgccgtctgaagtgaagggg
atggcccgacagctggaggagaaaaaagtacccattaatgaaatcaaaattaaccctgaa
aagctgttggatgtgcaagggcggctggaagcgtttttggcccaggagcaggaaatgaaa
gagagggcgcagaggtgctttgtgtcttacctacgctctgtttaccttatgaagaataag
gacgtgtttgatgtctccaaactgcctcttgcagagtatgctcagtcattgggtcttgcc
gttgctcccagagtccgtttcctccagaaagcacagaattctcagcctttagtgccaaga
ccaaatgaaaagccaaaagagccgggtactgacagtgatgaggaaatcaagagcttcaaa
gctcagcttgacggaaggacacctgtggaaatggatggggagaggagtgtctcctccagt
gaaggagaagacaattcagaggatgaagagaatatcgagagattaaaggccaaagacaag
tccacatttcattttacaaatgaggatgatgatgaggaggatgactgccgagatgtggag
atttttacagtgaagagacgagatgtgtttggggtgaaagacggtgaagcggcaccagca
gaagaaaccacaaaatcaaaacttaagaagactatattgaccaaagcaaaggatgccaag
aaagctttaaagaagaagttcaaagtgaacacaaaaatcgtttttgcagatgatggagag
gcaatccagcagtggcctcagatgcagaaaatggtaaaagatgcaggggaagaggaggat
gcagataatggcatcaatttggaaattgcaagaaaacggctgactgaagaggataaattt
gacaaagaattgtacaggcagaagattaaggaaaaacatcgggaaaaacgactgaaggaa
aaggctgccagaagaacgtcaagcaggagagataaagaggaaggggaagatgaagcagtt
gcttatcttgaccatgacggcgacaatgaagtagatctgagtgcacttcctgaccctgac
aagtaccgcgatatggaggaagatgagcaaaccgtggaagaaagtagcagtgacggtgaa
gaagttccaccaagaaagagaactttcagcagcagatccaatgaaaaggaagaaaaaata
gtagcggccaaaaagacgaaagccacacaaagatctgaggagccattcgagccactaaac
acgggactgtcactggcagaagatgaggagctggtcttacatctcctaaacagcagcagc
taa
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