Rana temporaria (common frog): 120929342
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Entry
120929342 CDS
T07929
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120929342 (CALCOCO1)
04131 Membrane trafficking [BR:
rtem04131
]
120929342 (CALCOCO1)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
120929342 (CALCOCO1)
Membrane trafficking [BR:
rtem04131
]
Autophagy
ER-phagy
ER-phagy recepters
120929342 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Crescentin
DUF7491
Prefoldin
Motif
Other DBs
NCBI-GeneID:
120929342
NCBI-ProteinID:
XP_040196657
LinkDB
All DBs
Position
2:complement(105712359..105808280)
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AA seq
536 aa
AA seq
DB search
MEANFHSVCFLNVAHTYVPSANVECHYTLPAGMKGSTRDWIGIFKVSGSSIHDYDTFVWA
SSSESSVDESVSHCSVQFQAYYLPHPGEQQYQFRYVDQQGTVKGISEPFVICEPRQMEDL
VTLEDEEASLDMILVVSKSAFLQQQLEFSQQERNDLMRVRLTLEEVVSTLKKKVQHLEAA
LESSDNKHLKLNQQYKELFEKEQTTRKEFNALSKIEAEHRERILQLESEIQIMNRNLLEK
VKETDILKTRKESLEAEKEQLKERLAEASSEKERSKLQIDALREKLRCTQDILSASQQKV
MLLGEELATVSSVRDRTISDLHKSRLETADLALKVSDISLRYKEGMGQWWQEKTALNHSM
EAKRDQIVNLKAEKLTLESNLQEERSQRQKLQCKLNQEKDACQVQLSESRRELSELKSAL
KVAQMEKEQLREEKQEMMQYMRRLEERLDKLADERWREDKVDTEENSPGLISLPESDDES
SEIRRFPVNEDPFTVSEQISSILPAFPRESLKVVINQPAPIACQLQPLPEDNPDSW
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaacttccattctgtctgtttcctgaatgtggctcacacttatgttcccagt
gccaatgtggaatgtcactacaccctgccagctggcatgaagggctccaccagggactgg
attggcattttcaaagtaagcggctcctctatacatgactatgacacctttgtttgggca
tcctcttcggaatcttctgtggatgaatcagtatcccattgcagtgtccagtttcaagcc
tactatcttccacaccccggtgaacagcagtaccagtttcgctatgtggatcagcaggga
actgtgaaagggattagtgaaccttttgtgatctgtgagccacgacaaatggaagacctg
gtcaccttggaggatgaagaggcttctctggacatgattttggttgtatcgaaatctgct
ttcttgcagcaacagctggagttctcccagcaggagaggaatgaccttatgagggttaga
ctcacactggaagaggtggtgagcactctgaagaagaaagtccagcacctggaggctgca
ctggagtcttcagacaataaacatttaaagctaaaccagcaatacaaggaactttttgaa
aaggagcagacaacaaggaaagaatttaatgccctgagcaaaattgaggctgagcaccga
gaacggattctgcaacttgagagtgaaatccagatcatgaatcggaacctgcttgaaaaa
gtgaaagagacagacattctaaagacaagaaaagaatcactagaggcagaaaaggagcag
ctgaaagagcgacttgcagaggcctcttcagaaaaggagcgttccaagttgcagatcgat
gctctgcgtgagaagctgcggtgcacccaagatattctctcagccagtcagcagaaagtg
atgctgttaggggaggagttggcaacagtctcttctgttcgagatcgcacaatatctgac
ctgcacaaaagccgccttgagacagctgaccttgcccttaaagtgtccgacataagtctc
agatataaagaaggcatggggcagtggtggcaagaaaagacagcactgaaccacagcatg
gaggccaagagagaccagattgtgaatctgaaagcagaaaagctgactttggaaagcaac
ctgcaagaagagaggagccagcgacagaaacttcaatgtaaactaaaccaggagaaagat
gcatgtcaggttcagttatccgaaagcagacgagagttaagtgagttaaaatcagctctg
aaagttgcacagatggaaaaggaacagctaagagaagaaaaacaggagatgatgcagtat
atgaggagactggaggaaaggctggacaagcttgctgatgaaagatggagagaagacaaa
gtggatacagaggaaaacagccctggattaataagtctgccagagtccgacgatgagtcc
tctgaaatcaggagatttcctgtgaatgaagacccttttacagtgagtgagcagatctct
tccatcttaccagcattccctcgagagtctctgaaggtggtgatcaatcagccagcaccc
attgcatgtcagctacagccattgcctgaggacaatcctgactcatggtaa
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integrated database retrieval system
