Rana temporaria (common frog): 120929363
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Entry
120929363 CDS
T07929
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120929363 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120929363 (HNRNPA1)
03041 Spliceosome [BR:
rtem03041
]
120929363 (HNRNPA1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120929363 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
120929363 (HNRNPA1)
Spliceosome [BR:
rtem03041
]
Common components
Common spliceosomal components
hnRNP proteins
120929363 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DUF4715
RRM_3
Motif
Other DBs
NCBI-GeneID:
120929363
NCBI-ProteinID:
XP_040196676
LinkDB
All DBs
Position
2:108676870..108689314
Genome browser
AA seq
384 aa
AA seq
DB search
MHKSEEPEQLRKLFIGGLSFETTDESLRNHFEQWGALTDCVVMRDPGSKRSRGFGFVTYA
NTEEVDAAMNARPHRVDGRMVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEESHLRD
YFEQYGKIEAVEIMTDRANGKKRGFAFVTFEDHDSVDKIVIQKYHTINDHNCEVRKALSR
QEMSTASSSQRGRGGGGGGSFGRGGGGGGGGGFGGSESYGGRGGNFGGSRGGGGFGGRGG
YGGGNEGGYNNGFGNDGGYGSNPPYSGNRGYGGGQGYGGGGQAGYGGSGGGYDGYSGGGS
GFGGGNGNFGGSSGGGGGSGGGNYSDFGSFNNQSSSNFGPMKGGGNYSARSSGPYSGGEK
PFNSGGGYGGGSSGGSGYGGGRRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcataagtcagaggaacctgaacaactccggaagcttttcattggcggtttaagcttt
gagaccacagacgaaagccttcgaaaccattttgaacaatggggcgccctaacagactgt
gtggtcatgagagatccaggctcaaaacggtcccgtggctttggctttgttacttatgct
aacactgaggaagttgatgctgctatgaacgcaagaccgcatagggtggatggtcgcatg
gtggagcctaaacgagcagtttccagagaggactctcaaagaccaggagcacatctaacg
gtcaagaaaatctttgttggaggaataaaagaggacacagaagaatctcacttgagagac
tattttgaacagtatggaaagatagaagctgttgagataatgacagaccgtgctaatggc
aagaaaaggggctttgcctttgttacatttgaagaccatgattcagtcgacaaaattgtc
attcagaaataccataccatcaatgaccacaattgtgaagtaaggaaagctttgtccaga
caagaaatgtccacagcatcttccagccaaagaggacgtggtggtggaggaggaggaagc
tttggacgtggtggtggtggaggcggtggtggtggttttggtggcagtgaaagctatggt
ggccgtggaggaaactttggtggaagcagaggaggtggtggttttggtggacgtggtgga
tatggaggtggcaatgaaggtggctacaacaacggatttggcaatgatgggggctatgga
agcaatccaccctactctggtaaccgtggatatggaggtggacaaggttatggaggcggc
ggccaagctggttatggtggaagtggtggtggatacgatggctatagtggcgggggcagc
ggctttggtggcggaaatggaaactttggtggcagcagtggtggtggcggtggtagcggc
ggcggcaattacagtgactttggcagcttcaataaccagtcatcatcaaactttgggcca
atgaaaggtggtggaaattacagtgcaaggagttctggaccttatagtggcggtgagaaa
ccttttaatagtggtggtggctatggaggtggttccagcggcggcagtggatatggtggc
ggaagaagattttaa
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