Rana temporaria (common frog): 120929475
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Entry
120929475 CDS
T07929
Symbol
SHMT2
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00260
Glycine, serine and threonine metabolism
rtem00630
Glyoxylate and dicarboxylate metabolism
rtem00670
One carbon pool by folate
rtem01100
Metabolic pathways
rtem01200
Carbon metabolism
rtem01230
Biosynthesis of amino acids
rtem01240
Biosynthesis of cofactors
rtem04981
Folate transport and metabolism
Module
rtem_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120929475 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120929475 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120929475 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120929475 (SHMT2)
Enzymes [BR:
rtem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120929475 (SHMT2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
120929475
NCBI-ProteinID:
XP_040196879
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Position
2:complement(126083266..126179607)
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AA seq
497 aa
AA seq
DB search
MLSFSVRRLAQPLRRCCHVRAQHTRSASQVGNQLWNGQESLADNDPEMWDLVQKEKDRQC
RGLEMIASENFCSRAALERPLGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQQRALDAF
RLDPGKWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRISATS
IYFESMPYKLNPGTGLIDYDQLEVTARLFRPKLIIAGTSAYARLIDYARMRKVCDEVKAY
LLADMAHISGLVAAGVIPSPFDHADVVTTTTHKTLRGARSGLIFYRKGVKSVDKKTGKDV
LYNFEDKINFAVFPSIQGGPHNHAIAAVAIALKQANSPMFHEYALQVLKNAKAMASSLLK
KGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELASITANKNTCPGDKSALTPGGLRLG
APALTSRNFRETDFEKVVDFIDEGIQIGLYVKSKTSKLQDFKNFLLEDKETVQKIADLRQ
RVEKFARVFPMPGFDER
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttctctgtccgccgcttggctcagcctttgcggagatgctgccatgttcgg
gcccagcacactcgatcagcatcccaagttgggaaccagttatggaatggacaggagagt
ctggcagacaacgacccagaaatgtgggaccttgtgcaaaaggagaaggacaggcaatgt
cgcggactggagatgattgcttcagagaatttttgtagccgtgcagctctggagaggccc
cttggatcctgtctgaacaacaagtattctgagggctatcctggaaaaaggtattatgga
ggcgctgaggttgtggatcagatagagttgttgtgccagcagcgtgctttggatgccttc
agactggacccagggaaatggggagttaatgtgcagccatattctggttccccagctaac
tttgcagcatacacagccctcctgcagccacacgaccgcctcatggggctggatcttcct
gatggaggacatctaacacacgggtacatgtctgatgtgaaacgtatctcagctacctca
atttactttgaatccatgccttacaagcttaatccaggaactgggttaattgactatgac
caactagaggtgaccgctcgtctcttccgaccaaaactcattattgctgggaccagtgca
tatgcgcgactgatagattatgccaggatgagaaaggtgtgtgatgaggtgaaggcctac
ctcctggcagatatggcccacatcagtgggctggtagcagctggtgtcattccgtcacct
tttgatcatgctgatgtggtcacaacgacgacgcacaagactctacggggggccagatct
ggacttatattttaccgaaaaggtgtcaagtctgttgataagaaaactggaaaagacgta
ctttacaactttgaagacaaaatcaactttgcagttttcccttcaattcagggagggccg
cacaatcatgcaattgcagctgtggcaatagctttaaagcaggctaattctccaatgttc
catgaatatgcactgcaggtcctaaaaaatgctaaggcaatggcgtcttccctacttaag
aaggggtacacacttgtctcaggaggaacagataaccaccttgtgctagtagacctccgg
cctaaaggtatggatggagcacgagcggagagggtacttgagcttgcatctataactgct
aacaagaacacatgccctggggataagagtgctctgactcctggaggcctgcgactaggt
gcccccgcacttacatcccgcaattttagagagaccgactttgagaaagtggttgacttt
attgatgaaggcattcagattgggctttatgtgaagagcaaaacatccaaactccaagat
tttaagaattttctcctagaggacaaggagacggtacagaaaattgcagatctccgtcag
cgtgtagagaagtttgctcgtgtcttccccatgccaggatttgatgagcgctag
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