Rana temporaria (common frog): 120929513
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Entry
120929513 CDS
T07929
Symbol
PYM1
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
rtem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120929513 (PYM1)
03015 mRNA surveillance pathway
120929513 (PYM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120929513 (PYM1)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120929513 (PYM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
CDGP
DUF87
Motif
Other DBs
NCBI-GeneID:
120929513
NCBI-ProteinID:
XP_040196989
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All DBs
Position
2:131237266..131271566
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AA seq
192 aa
AA seq
DB search
MAAPYVTDESGKYIASTQRPDGTWRKQRKVKEGYVPQEEVPVYENKYVKFFKSKPSLPPG
LSHQEPPANMTQQSTKPETETALSKTAKRNMKRSQKRKQDKGEREPVEEARQELEKVNIS
ETTEAKDKTTDENPAAEKAKKLKNLRKKLRQVEDLQQKIDCGEIKQPSKEQLDKLSRRKA
LEEEIEDLELDL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccctatgtgaccgatgaatccggaaaatacatagcatccactcagcgtccg
gatggtacatggcggaaacagcggaaagtgaaggagggctatgtgcctcaagaagaggtt
cctgtttatgaaaacaaatatgtaaaattcttcaaaagcaagccttcacttcctccaggc
ctgagccatcaagagccccctgctaacatgacgcagcagtccacaaaaccagaaacagaa
accgccctttctaagacggccaaaaggaatatgaagcgcagtcagaaaagaaaacaagat
aaaggtgagcgggagccagtggaagaagccaggcaggaactggagaaggttaacatttct
gaaaccacagaagcaaaggacaaaacgaccgacgagaacccagcagctgagaaggcaaag
aaactcaagaatctccgtaagaagcttcgacaggtggaggacctacagcaaaaaatagac
tgtggagagattaaacagccatccaaagagcagttagacaagctgtccaggaggaaagct
ttagaggaggaaattgaagacctagaactggacttgtag
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