KEGG   Rana temporaria (common frog): 120929670
Entry
120929670         CDS       T07929                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    120929670 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rtem01009]
    120929670 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rtem04515]
    120929670 (PCDH20)
Protein phosphatases and associated proteins [BR:rtem01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120929670 (PCDH20)
Cell adhesion molecules [BR:rtem04515]
 Cadherins
  Protocadherins
   120929670 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_4 He_PIG DC_STAMP
Other DBs
NCBI-GeneID: 120929670
NCBI-ProteinID: XP_040197282
LinkDB
Position
2:complement(159637205..159642235)
AA seq 925 aa
MTAVSLGLNYQGNERITQHTGGQSWLLKPFNLDMGQQANPTRITLTHAQPYLFLYLIALY
AGPRLSLASYSTASELLYTLQEGFPKGYLIGNIVHDLQLGTDPPLLFSLASKGLSGKYVT
LNDSTGELYTSAEELDREALCPQNSGIQDCALLLDIIILPQEYFRLIKVKIAIVDVNDNA
PVFPVGQIYITVPENAPVNTRLVIEHPANDPDGGMNGVQTYRLVDNYGVFTLDVEENESG
ERTPYLIIMGPLDREVKSEYKTIIIAEDGGNPPLVGSATLSILISDVNDNCPQFNESLIN
VMLPGNTSTGVKVTSVQAEDKDLGNNALITYAFSERVPHSSKELFELDESTGVIKLSKKI
DGGTIKQHKLTVLANGPGCIPAVITVIISIVKVTFRPPEVIPRYIASEENGIVYLKELEP
IHSPIAFFTIKDPDGKYKVNCYLEGEGPFRLTAYKPYTNEYLLETTNALDYEVKRVYNIA
VVAVGIHGAHVKTSLQVQILDENDNAPVFTQSTIEVSIEENNPANAFLAKLHATDVDSGE
RGQVSYYLGADAPSYFALDKQTGILTVSTLLDREEKERYRFTVKARDFGTPPKESVATVH
ITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADSGQNGWVALSIVNGSDIFV
IDTGKGLLRAKVSLDREQQSSYSLWVEASDGGDPTLSSTAKITILLLDVNDNPPLVLFPQ
SNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFKIDPKTGNITL
EEALMRNDYGLYRLLVKVSDHGYPEPLFSTVMVNLFVNDTVSNESYIESLLKKDPDINIE
EKEPQIAIEPTQKKMEADSCVPTLVTLSIFCFASIILVTLMAMYICLRRGKKAHRINENL
EVQIPLNGKLDFHLLDKKPIEISNI
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgactgcagtttcattgggattaaactaccaagggaatgaaaggatcacgcagcacaca
ggaggacagagctggcttctaaagccgttcaacctggatatggggcagcaagccaatcca
accaggatcacacttacccatgcacagccctacttgtttctgtatctaatcgcgctctac
gccggacccaggctcagcttagcaagttacagcacagcttcggaattgttgtacacgctg
caagaaggatttcctaaggggtatctcattggaaacattgtgcatgatctgcagctgggg
actgacccccctcttttgttcagcttggcatctaaagggcttagtgggaaatatgtgaca
ctcaatgacagcacaggggagctgtacacatcagcagaggagttggacagagaagccctc
tgcccgcagaactctggcatccaggattgtgcccttctgcttgatattatcattctgcca
caggaatacttccggctcatcaaagtaaagatcgctatcgttgatgtgaatgataatgct
cctgtgtttcctgtgggacagatttacattacagttccggagaatgcacctgttaacaca
aggctggttatagaacatcctgctaatgaccctgatgggggaatgaatggggtccagacc
tacaggttagtggacaactatggtgtgtttacattagatgtagaagaaaatgaaagtggg
gaaaggacgccttacctaattatcatggggcccctggacagagaggtcaaatctgagtat
aaaacaattataattgcagaagatggaggcaatccacctcttgttggctctgccaccctt
tccattcttataagtgatgtcaatgacaactgtcctcagttcaacgagtctttgattaat
gtgatgcttcctgggaatacgagcactggggtaaaggtaacttcagtgcaagctgaggac
aaggatttggggaataatgccctgatcacttatgcctttagtgaacgggttccacattca
tcaaaagaactttttgaattggatgaatcaacaggagtaataaaactttccaagaagata
gatggtggtaccatcaaacaacataagctaactgtacttgccaatggtcctgggtgcatc
ccagctgtgataactgtcatcatttctattgtaaaagttacgttccgcccaccagaagtc
ataccacgttatattgccagtgaagaaaatgggattgtgtatttaaaagagctagaacct
atccactctccaattgctttttttactatcaaagacccagatggcaagtacaaagtaaat
tgctacttggagggagaaggaccatttcgtctgactgcatacaagccttatacaaatgaa
tatttgcttgaaactacaaatgctctagattatgaggtgaagagggtctataatatagca
gtggttgcagttggcatacatggggctcatgttaagacgtcattacaagttcagatcctg
gatgagaacgataatgctcccgttttcactcagtctacaatagaagtgagcatagaagaa
aacaatccagccaatgcttttctggccaaattgcatgctacagatgttgacagtggtgaa
agaggacaggtttcctattatttaggagcggatgcaccttcttattttgctctagacaaa
caaaccggaattcttacagtttccacattgctagaccgagaggagaaggagagatacagg
ttcactgtaaaagccagagactttggcacacctccaaaggagtcagtagccactgttcat
attaccgtgctggacaaaaatgacaacagccctcgtttcatcaacaaagatttcagcttt
tttgttcctgagaactttccaggctttggtgaaattggagtaatcagtgtcacagatgct
gactctggacagaatggatgggttgctctttctatagtgaatggaagtgacatttttgtc
attgacactggcaaaggactcttgagagcaaaggtatcactggacagagaacaacagagt
tcttatagtctctgggtcgaagcgtcagatggtggtgacccaaccttgtcttctacggct
aaaattactatactgcttctggatgttaatgacaacccaccactggtgttattccctcaa
tcaaacatgtcctatcttctagtcctgccttcaactctacctggctcccctgtcaccgag
gtttatgctgtggataaagacacagggatgaatgcagttattgcttacagcataatagga
aggaggggtcccaggccagagtcatttaagatagatcccaagacaggaaatataacttta
gaagaggccctgatgaggaatgactatggtttatacaggttgttagtgaaagttagtgat
catggctatccagaaccactgttctccacagtgatggtcaacctgtttgtgaatgacact
gtcagcaatgaaagctacatagaaagtttgcttaaaaaagatcccgacattaacatagaa
gaaaaagagccccagatagcaattgagcccactcagaaaaagatggaggcggattcctgt
gtcccgacactggtcaccctgtccattttctgctttgcctccatcatcttagtcactcta
atggcaatgtacatctgcctaaggagaggcaaaaaagctcacagaatcaatgaaaatctt
gaagtgcaaatcccactcaatggcaaattagactttcatttgcttgataaaaagccaatt
gagatttctaatatttaa

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