Rana temporaria (common frog): 120929683
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Entry
120929683 CDS
T07929
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120929683 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120929683 (DIS3)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120929683 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Motif
Other DBs
NCBI-GeneID:
120929683
NCBI-ProteinID:
XP_040197301
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All DBs
Position
2:complement(167293143..167354604)
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AA seq
956 aa
AA seq
DB search
MLKSKTFVKKTRSGGILKIVREHYLRDDITCGFQGCKECQQENPVLRQDTHMQSSLCQFP
HYILPDTNVLLHQIDVLEDPVIHNVILLQIVLQEVRRRSAPVYKRIRDLTSNPDKYFYTF
TNEYHRETYIEQEQGENANDRNDRAIRTAVKWYNKHLQNSQKNKNLQVLLITNDRKNKEK
ALEEGIVAYTCEEYIKSLLANPELVDRLSYVSDDQNEVESSKVIFSEHLPLSKLQQGIKS
GIYLQGTFRASRDNFLEGTVWVHGDALENKEIILQGLRSLNRAMHEDIVAVQLLEKENWV
APSAVVLQDDDDDGENEDIESVDEKEKMLKTVEKSNAKPSGRVVGIIKRNWRPYCGMLSK
SQIKESTRHLFTPADRRVPRIRIETRQASVLEGQRIIVAIDGWPRNSRYPNGHFVKNLGS
AGDKETETEVLLLEHDVPHQPFSQAVLSFLPNMPWSITPEDMKHRIDLRHLYVCSVDPPG
CTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESANRGTTVYLCDKRIDMVPD
LLSSNLCSLRSQVDRLSFSCIWELSHDAKIIKTTYTKSVINSKASLTYAEAQMRIDSPDM
NDEITKSLRLLNKLAKILKKRRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSM
VEEFMLLANISVAEKIFDEFSEYALLRKHPAPPPGNYDILVKAASSKDLEIKTDSAKALA
DSLDGAESAEFPYLNTLLRILATRCMMQAVYFCSGLDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAVGADCTYPDLTDKQKMAEICKNINFRHKMAQYSQRASVAFHTQLFFKN
KGIVNEEGYILFVRKNAIVVLIPKFGLEGTVFFEDKDRVKPKLLYNDEIPYLTVESTTFY
MFDKVKVKISLDASNIQHQKIRMALVEPEIPGVTVSEGNQKNTNGEPVTKKSKRAK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatcaaagacctttgtgaagaagacacgctcgggcggaattttaaaaattgtc
cgagagcattacttgagggatgatattacctgtggtttccaaggctgtaaagagtgccaa
caagagaacccggtcctccgtcaggatacccacatgcaaagttctctttgtcaatttccc
cactacattttgcctgacaccaatgtgttgcttcaccagattgatgtcctcgaagaccca
gttatccacaatgtgatcttactgcagatagtactccaggaagttaggcgtcgcagtgcc
ccagtttacaaacgaatccgggatcttactagtaaccctgacaagtacttctacacgttc
accaatgagtaccatcgtgagacctacatagaacaagaacaaggagagaatgctaacgat
cggaacgacagagcaattagaactgcagtaaaatggtacaataagcacttgcagaattca
caaaaaaacaaaaatctacaagtacttctaataacaaatgaccggaaaaacaaagagaaa
gcgttggaagaaggaattgtagcatacacctgtgaagaatacataaaaagtttgttggct
aatccagaacttgttgatcgtctttcatatgtttctgatgaccagaatgaagtggaaagt
agtaaagttatcttttcggagcatcttcctttgtctaaattacagcaagggataaaatct
ggcatttaccttcaaggaacattcagagcaagtagagacaactttttagaaggaactgtt
tgggtccatggagatgctttagagaacaaagagataatcttacaagggttacgaagctta
aaccgagcaatgcatgaagacattgttgctgtacagctcttggaaaaggagaattgggtg
gctccatccgctgtggtcctccaagatgatgatgatgatggtgaaaatgaagatattgaa
tctgtagatgaaaaagaaaaaatgctaaaaactgttgaaaagagcaatgcaaaaccatct
ggaagagtagtcgggatcataaaaaggaactggagaccatattgcggcatgttgtcaaag
tctcaaattaaagagtccactcgtcatctcttcacaccagctgaccggagagtacctcgc
attcgcatagagaccagacaagcctctgttctggagggacagagaattatagtggcaatt
gatggatggccaagaaactctcgatatcctaatggacattttgtaaagaacctgggttca
gctggagataaggagaccgagacagaggttttacttctggaacatgatgttcctcaccag
ccattctcgcaggctgttctcagcttccttcccaatatgccttggtccattacacctgag
gacatgaagcacagaattgatttgagacatttatatgtgtgtagtgtggatcctcccggc
tgtacagacattgacgatgcgctgcattgcagggagctggaaaatggtaacttagaggtt
ggagtgcatattgcagatgtgagccattttattagacctggcaacgctttggatcaggaa
tctgcaaaccggggtactactgtatacctgtgcgacaagagaattgacatggtccccgat
ttgctcagttcaaatttatgctccttaagatcacaagtggatagattgtcgttttcatgc
atttgggaactgagccatgatgccaaaattattaaaacaacatatacaaaaagtgtcatc
aattcaaaagcttcccttacctatgcagaagcacagatgagaattgattctccagacatg
aatgatgagattactaaaagtctccgtctgctgaataaattggcaaagattttgaagaag
cgaagaatagataatggtgctttaactctttcttcccctgaggttcgatttcacatggac
agtgaaactcatgaccccatagatcttcagaccaaggagctcaaggaaacaaattccatg
gtggaagagttcatgttgctcgccaacatttcagtggctgagaaaatctttgacgaattt
tcagagtatgcattactgcgtaaacatccagctccacccccgggaaattatgacattctg
gtgaaggctgcaagttccaaggatttggagataaaaactgattccgcgaaggctctggct
gactccctagacggcgcagaatcagctgagtttccctatttgaatactctgctgaggatc
ctggctactcgctgcatgatgcaggcagtctacttctgctcaggattggatagtgatttc
caccactatggtttagcctctccaatctacacacatttcacctctcctattagaaggtat
gctgatatcatagtacacagacttctggctgtagcagttggggcagactgtacgtaccct
gatctgacagacaaacaaaaaatggcagaaatctgcaaaaatattaacttcaggcacaag
atggctcagtattcgcaaagagcttctgttgcatttcacactcagctgttctttaaaaac
aaaggaattgtgaatgaagaaggatacatcctgtttgttcggaaaaatgcgattgtggta
ttgatcccaaagtttggtttagaaggcacggtcttctttgaagacaaagacagagtaaag
cctaagctactttacaatgatgagattccttatctgactgtggaaagcaccaccttctat
atgttcgacaaagtaaaagtaaaaatttctttggacgcttcaaacattcagcaccagaaa
atacggatggctctcgtggagcctgagattcctggtgttaccgtaagtgaggggaaccaa
aaaaacaccaatggagagccagtaaccaagaagagcaagcgggcaaaatag
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